Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCSSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHCCCCCCHHHHHSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCSSSCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC RALTGGQQAEDPTLASGAHQWPGSVEKLQGSVWCDAETLLSSSRTGGQAPPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQGLCGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRYTDGGARPVIWWAPDVQHLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAPCPGIHHTEWARLALFD |
1 | 2zuyA | 0.08 | 0.08 | 3.22 | 0.46 | CEthreader | | GTTDGKGHIIGDEQADFRNEQGRILSGPEYLTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSHEAYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTGLYSTGLGHGDAMHVGDL--DPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHAGTDVGRGMAAH |
2 | 5yh0A | 0.07 | 0.06 | 2.45 | 0.52 | EigenThreader | | ------------------VSSVLQSLFEHPLYRTVLPDLTEEDTLFNSYPSRHNPVIAALLRDLLSQKISSVGMKSGGTQLLIMSFQNY----------------GQALFKPMKQTRHNAEIAAFHLDRILDFRVPPVAGRLVNMTREILCGKPDQIEGSLAAFLPMGNMDRHHLDNGRGFGKHCCSTYLRLQLLAKEEYKLSSLMEESLLQDRLVPV |
3 | 4kqaA | 0.16 | 0.16 | 5.17 | 0.58 | FFAS-3D | | ------HQPIPPSLGEKDLSDPFNLRKLYDLTKCKKNITLSKF-WEPEDDNWYSDDQIDNLHDLNTSPIKHV-HIDGTQVKFVFTFKNDKQAVFKPRFGRDYESDPNHFYFSDFERHHAEIATFHLDRVLGFRRAIPTVGRVLNTTELFEKALPDKEGSVQVFLPDESAVPRRTYSKKNQVAEWQSSNYCTDK--VKTKRQYAHGRRLLDLVDIHILD |
4 | 5xomA | 0.14 | 0.11 | 3.91 | 0.76 | SPARKS-K | | ------------------------EYFNIHAWDVWHDMISVRALTVDS-----DVEIYKVLKAMSSAKITQATTGYKGTQLAMFSLDGPQIKRYSRNKIILGTPYEGYDRH------NAEIAAFHLDRLLGFYRAPPVVGRYINLATTFIKDKDENLCALILWLPEKWPVLKLPHPWRRTYAKWETYCESVV------IKEPYTGPRLLDLIDTSIFD |
5 | 5xomA | 0.20 | 0.06 | 2.06 | 0.95 | CNFpred | | --------------------------------------------------------IYKVLKAMSSAKITQATTGYGTQLKAMFSLDG-----------------QIQNVVFKPKRHNAEIAAFHLDRLLGFYRAPPVVGRYIN-------------------------------------------------------------------------- |
6 | 1t0rA | 0.05 | 0.04 | 1.73 | 0.67 | DEthreader | | NFPEEMSGARMAWEKYDEPYKITY-PEYVSIEKDSGAYSIKEGFVDAPWVSTMQLHFGAIA--E----ASTAERMA-----GMDENGQI-----------DDMMMT--LTFETGFTNM-QFLGLAADAAEAGD--A-ISIQTESR-HAQQGGP---------------MVDV--AIWRSWKSLDETHHGMHLGVWYW------DPAAGVERWL-EK-- |
7 | 4hndA | 0.11 | 0.09 | 3.17 | 0.71 | MapAlign | | ---------------------PEFAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAE--LAIFPERIQGSSGSYFVKDP-----------------QGRIIAVFKPKGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNRIGLPPKVGSFQLFNWLIKYDCPPVIKVAAIDFSQEIKDLILPKIAVRGQILNLTQALKDNKSPLHLV- |
8 | 5wrrA1 | 0.15 | 0.13 | 4.33 | 0.52 | MUSTER | | QAL----NVPEEPPLLGAEDSLLASQEALRARWNRRHKMYRPPLQLRLEASWVSPVVSKLLQDMRHFPTISADYSKSGVHLKLVLRFSDFGKAMFKPMRQQRDTPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVKNEILQSVFFVSPA--FAKCPYMCKTEYAV------------CGKPHLLPSLNLA----------- |
9 | 5xomA | 0.20 | 0.15 | 4.83 | 3.62 | HHsearch | | -------------------------EYFNIHAWDVWHDMISVRATVDSDV-----EIYKVLKAMSSAKITQATTGYKGTQLAMFSLDGP----------------QIQNVVFKPKRHNAEIAAFHLDRLLGFYRAPPVVGRYINLEVLPVAIKDGMEGALILWLPEKWPVL-------KLPHPWRRYNKK-MAK-WETDSHYCEGPRLLDLIDTSIFD |
10 | 1vt4I | 0.09 | 0.09 | 3.33 | 0.46 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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