Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
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| SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSCCSCSSSSSSSSCC MDRAALLGLARLCALWAALLVLFPYGAQGNWMWLGIASFGVPEKLGCANLPLNSRQKELCKRKPYLLPSIREGARLGIQECGSQFRHERWNCMITAAATTAPMGASPLFGYELSSGTKETAFIYAVMAAGLVHSVTRSCSAGNMTECSCDTTLQNGGSASEGWHWGGCSDDVQYGMWFSRKFLDFPIGNTTGKENKVLLAMNLHNNEAGRQAVAKLMSVDCRCHGVSGSCAVKTCWKTMSSFEKIGHLLKDKYENSIQISDKTKRKMRRREKDQRKIPIHKDDLLYVNKSPNYCVEDKKLGIPGTQGRECNRTSEGADGCNLLCCGRGYNTHVVRHVERCECKFIWCCYVRCRRCESMTDVHTCK |
1 | 6ahyB | 0.34 | 0.25 | 7.54 | 1.00 | DEthreader | | -----------------------------------------LL-CGSIPGLVP--QLRFCRNYIEIMPSVAEGV-LGIQECQHQFRGRRWNCTTI-DD-------SLAIFGPVLDATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSH------------WGGCSEDADFGVLVSREFADARENRP-----DARSAMN-HNNEAGRTTILDHMHL-CCHGLGSCEV---TCWWAQPDFRAIGDFL-D-YDSASEMVVEHVETLRAYSL----FPPTERDLVYYENSPNFCEPNPET-GSFGTRRTCNVTSHGIDGCD--L-LCCGRGHNTRTERECH----------ECIRIY-DVHTC-- |
2 | 4f0aB | 0.36 | 0.28 | 8.41 | 4.62 | SPARKS-K | | ---------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST--------LQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRI-GGRGWVWGGCSDNAEFGERISKLFVDGLETGQ-----DARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL--EMRGAIADAFSS-----VAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
3 | 4f0aB | 0.35 | 0.28 | 8.26 | 1.71 | MapAlign | | ---------------------------------------------------TGPKAYL------TYSASVAVGAQNGIEECKYQFAWERWNCPEST--------LQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIGGRGW-VWGGCSDNAEFGERISKLFVDGLETG-----QDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGAIADAF-------SSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGSQWERCKRLCCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
4 | 4f0aB | 0.36 | 0.28 | 8.33 | 1.67 | CEthreader | | ---------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST--------LQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIGGRG-WVWGGCSDNAEFGERISKLFVDGLETGQ-----DARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGAIADAF-------SSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLREKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
5 | 4f0aB | 0.36 | 0.28 | 8.41 | 3.02 | MUSTER | | ---------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST--------LQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGR-IGGRGWVWGGCSDNAEFGERISKLFVDGLETG-----QDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGA-------IADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLREKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
6 | 4f0aB | 0.36 | 0.28 | 8.41 | 6.45 | HHsearch | | ---------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTL--------QLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNG-RIGGRGWVWGGCSDNAEFGERISKLFVDGLETG-----QDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGA--I-----ADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
7 | 6ahyB | 0.40 | 0.32 | 9.46 | 2.98 | FFAS-3D | | --------------------------------------------LLCGSIPGLVPQLRFCRNYIEIMPSVAEGV-LGIQECQHQFRGRRWNCT--------TIDDSLAIFGPVLDATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHGP----PGEGWWGGCSEDADFGVLVSREFADARENRPD------ARSAMNHNNEAGRTTILDHMH--LCCHGLSGSCE-VTCWWAQPDFRAIGDFLDYDSASEMVVEHRESRGWVETLRAYSLFPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGH---NTRTERECHCIFHWCCYVSCQECIRIYDVHTC- |
8 | 4f0aB | 0.28 | 0.20 | 6.12 | 1.25 | EigenThreader | | ---------------------------------------------------TGPKAYLTYSAS------VAVGAQNGIEECKYQFAWERWNCP-------------ESTLNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRG-----WVWGGCSDNAEFGERISKLFVDGLETGQD-----ARALMNLHNNEAGRLAVKETMKCKCHGISGSCSI---QTCWLAE-FRDIGNHLKIKHDQALKLE--------MRGAIADAFSSVAGSELIFLEDSP--DYCLKSLGLTEGRECLQSGKNLSQWERRTDCGLRVEEKKTEIISSCWCC--------TVKCEVVIKHFCA- |
9 | 6ahyB | 0.43 | 0.36 | 10.53 | 3.77 | CNFpred | | --------------------------------------------LLCGSIGLVPMQLRFCRNYIEIMPSVAEGVMLGIQECQHQFRGRRWNCTTIDDS-------LAIFGPVLDMATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHMGP--PGEGWMWGGCSEDADFGVLVSREFADARENR-----PDARSAMNMHNNEAGRTTILDHMHLMCMCHGLSGSCEVMTCWWAQPDFRAIGDFLMDMYDSASEMVVEMHWVETLRAMYSLFMPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEMRMEMCHCIFHWCCYVSCQECIRIYDVHTCM |
10 | 7kc4D | 0.33 | 0.23 | 6.92 | 1.00 | DEthreader | | -----------------------------------WSVNN-----FL--I-T---G--PK-AYLTYTTSVALGAQSGIEECKFQFAWERWNCPE--NA----------LQLSTHSATRETSFIHAISSAGVMYIITKNCSMGDFENCGCGW--I----------GGCSDN-VEFGERISKLFVDSLEKGK-----DARALMNLHNNRAGRLAVRATMKRTCKCHGISGSCSIQTCWLQLAEFREMGDYLKAKYDQALKIEM--DKFLP----------SAEAELIFLEESPDYCTCNSSLGIYGTEGRECLQNR---SCGR-LCTECGLQVEERKTEVIS------------CRH-VVSKYYCA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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