Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCSSSSCCCCCSSSSCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEDKRSLSMARCEERNSRGQDHGLERVPFPPQLQSETYLHPADPSPAWDDPGSTGSPNLRLLTEEIAFQPLAEEASFRRPHPDGDVPPQGEDNLLSLPFPQKLWRLVSSNQFSSIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRVGVKSAPRHQEEDKPEAAGSCLAPADTEQQDHTSPNENDQVTPQHREPAGPNTQIRSGSAPPATPVMVPDSAVASDNSPVTQPAGEWSEGSQAHVTPVAAVPGPAALPFLYVPGSPTQMNSYGPVVALPTASRSTLAMDTTGLPAPGMLPFCHLWVPVTLVAAGAAQPAASMVMFPHLPALHHHCPHSHRTSQYMPASDGPQAYPDYADQST |
1 | 1vt4I3 | 0.04 | 0.04 | 2.21 | 1.36 | CEthreader | | ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 4btgA3 | 0.12 | 0.09 | 3.28 | 1.13 | SPARKS-K | | ---GFNLKVKDLNGSARGL--TQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSE--------------LLWEAYVYRVGRTATYPFDAN--AVVSSVLTILGRLWSPSTPK-----------------------ELDPSARLRNTNGIDQLRSNLALF----------IAYQDMVKQRGRAEVFSDEELSSSPFKLRPINETTSYIGQTSAIDHMGQVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGAPIGNTRGTVNSNGAEMTFPSVVRDPMVIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLVWNVRTELRIPVGYNAIEGG--------SIRTPE-PLEAIAYNKPIQPSEVLQAKVLDLANHHIWP------------------------- |
3 | 2lduA | 0.39 | 0.10 | 2.87 | 1.33 | CNFpred | | -------------------------------------------------------------------------------------------------AFLTKLWTLVSDPDDALICWSPSGNSFHVFQGQFAKEVLP-----KYFKHNNMASFVRQLNMYGFRKVVHIEQG---------GLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1vt4I3 | 0.05 | 0.04 | 2.18 | 1.95 | MapAlign | | -TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2lduA | 0.33 | 0.09 | 2.84 | 4.70 | HHsearch | | ---------------------------------------------------------------------------------MGHHHHSHMAGPSNVPAFLTKLWTLVSDPDTALICWSPSGNSFVFDQGQFAKEVLP-----KYFKHNNMASFVRQLNMYGFRKVVHIEQGGL---VKPE------RDDTEFQHPCFLRGQEQLLENIKRKVTSVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4btgA | 0.10 | 0.10 | 3.64 | 1.05 | SPARKS-K | | AGGALSNQFTEYHQSTACNPEIITGSSNRAIKADAVGKVPPTAILEQLRTLAPSEHELFHHITTDFVCHVLSPAAYVYRV-----------GRTATYPLRRMLTALSSVDQAT----FKAKGAL--APALISQHLANATAFERSFDANASSVLTILGRLWGIDQLRSNLFIAYQDMVKQRGRAEVFSDEELSSSPFKLRPINETTSYIGQTSAIDHMGQPSHVDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLA-PIGNTFAVSAAVYEAVSQRGTVNSNGA-EMTLGFPSVVERDYALDRDGIVDERSMFNYYAAVMHYAVAHNPEVVVSEHQGVVWNVRELRIPVGYNIEGGSIRTPEPLEAIAYNKPQPSEVLQAKVLDLIHIWPWHEASTEFAYEDAYSVTIRNGLGQRR |
7 | 5hdkA | 0.40 | 0.08 | 2.44 | 1.24 | CNFpred | | --------------------------------------------------------------------------------------------------FLSKLWTLVEETHNEFITWSQNGQSFLVLEQRFAKEIL-----PKYFKHNNMASFVRQLNMYGFRKVVHI---------------------VEFQHPYFKQGQDDLLENIKRK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2pffB | 0.05 | 0.05 | 2.40 | 1.66 | MapAlign | | ELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAEQVQDYVNKTNPAGKQVEISLNGAKNLVVSGPQSLYGLNLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
9 | 1hktA | 0.37 | 0.09 | 2.67 | 4.47 | HHsearch | | --------------------------------------------------------------------------------------------GSGVPAFLAKLWRLVDDADTRLICWTKDGQSFVINQAQFAKELLPL-----NYKHNNMASFIRQLNMYGFHKITSIDNGGL----R------FDRDEIEFSHPFFKRNSPFLLDQIKRK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5hdgA | 0.43 | 0.09 | 2.57 | 1.23 | CNFpred | | --------------------------------------------------------------------------------------------------FLTKLWTLVSDPDDALICWSPSGNSFHVFQGQFAKEVL-----PKYFKHNNMASFVRQLNMYGFRKVVHIE--------------------TEFQHPCFLRGQEQLLENIKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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