Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCHHHCCCCSSSSSSSCCCCCCSSSSSSSSSSCCCCSSCCCCCCCCCCCSSSSSSCCCSSSCCCCCCCCCCCCCCSSSSSCCCCCC MSASASVGGPVPQPPPGPAAALPPGSAARALHVELPSQQRRLRHLRNIAARNIVNRNGHQLLDTYFTLHLCSTEKIYKEFYRSEVIKNSLNPTWRSLDFGIMPDRLDTSVSCFVVKIWGGKENIYQLLIEWKVCLDGLKYLGQQIHARNQNEIIFGLNDGYYGAPFEHKGYSNAQKTILLQVDQNCVR |
1 | 5dfzA | 0.20 | 0.12 | 3.93 | 3.62 | HHsearch | | ---------------------------------------------------NISLFYGDGFIPCFFILESIRG----ELLYVSEVQSGSLKLSFQELPKLT------GASTMIVLKLVG----LWCVLCTYTIDLNKLQPINEDTVLTGTNAPVLDLIDGSYTLLLKLNKL---LEY---SSQVHEEI |
2 | 6kxuE | 0.16 | 0.11 | 3.54 | 1.14 | CNFpred | | ------------------------------------------STEIVFRCSNLESKDLFSKSDPFLVVSKIVEHGTPIPVSKTEVRKNDLNPIWKPVFLSV--QQVGSKDSPVIIECSDFNSGKHSLIGKVQKSLSDLEKLHL-----GQGINFSLPT-------------QNKVLKSQLFVDKFTET |
3 | 6kxkA | 0.15 | 0.09 | 3.06 | 0.83 | DEthreader | | --------------------------------------AS-ISTEIVFRCSNLESKDLFSKSDPFLVVSKIVEHGTPIPVSKTEVRKNDLNPIWKPVFLS-V-Q-QVGSKSPVIIECSDFNSNKHSLIGKVQKSLSDLEKLHLAG-QGIKSQLFVKFTE----------------------------- |
4 | 6kxkA1 | 0.17 | 0.11 | 3.66 | 0.91 | SPARKS-K | | -------------------------------------------IELSFSASNLRDRDVLSKSDPMVVVYQKEKDATLSEVFRSEVVLNSLAPKWKKFIVAYHFETV----QTLVFRVYDVDTKEQQFLGEATCALSEIIT-KST-------------RTSTLELKRKDGFAPQAQPHHIIHAE----- |
5 | 1cjyA1 | 0.11 | 0.06 | 2.33 | 0.63 | MapAlign | | -------------------------------------QYSHKFTVVVLRATKVTKGAFGDTPDPYVELFIST---TPDSRKRTRHFNNDINPVWNETFE--------FILNVLEITLMDANYVMDETLGTATFTVSVGEKKEVPFIFNQVTEMVL----EMSLEVC---------------------- |
6 | 1cjyA1 | 0.11 | 0.07 | 2.66 | 0.52 | CEthreader | | -----------------------------------EHQYSHKFTVVVLRATKVTKGAFGDTPDPYVELFIST---TPDSRKRTRHFNNDINPVWNETFEFIL---DPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIVTEMVLEMSLEVCS------------------------- |
7 | 3hn8A | 0.15 | 0.13 | 4.32 | 0.72 | MUSTER | | LELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLL-TVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLK-KRKTSIKKNTLNPTYNELVFDVAPESVENV--GLSIAVVDYDIGHNEVIGVCRVGPEAADPHGREHWAANPRKPV----EHWHQLVEEKTLSS---------------- |
8 | 6kxkA | 0.12 | 0.12 | 4.12 | 1.70 | HHsearch | | GEATCALSEIITKST-RTSTLELKRAQPHHGKLIIHALASKISTEIVFRCSNLESKDLFSKSDPFLVVSKIVEHGTPIPVSKTEVRKNDLNPIWKPVFLSVQQVGSK--DSPVIIECSDFNSGKHSLIGKVQKSLSDLEKLHQGINLNKVLKSQLFVDKGFFTASNG----NPRLPDSLHYIDPSAIM |
9 | 5dfzA | 0.17 | 0.12 | 3.84 | 0.89 | FFAS-3D | | ----------------------------------------------NISLFRLIKEYGDGFIPCFFILE----SIRGELLYVSEVQSGSLRK-LSFQELPKLT----GASTMIVLKLVG----LWCVLCTYTIDLNKLQPINEDTVLIGTNAPVLDLIDGSYTLLLKLNKLLEYSSQVHEEINEIS-- |
10 | 6pbcA4 | 0.07 | 0.05 | 2.20 | 0.72 | EigenThreader | | QGELWAVDRLQVQEFMLSFLRDIEEP----YFFVWNSQ--CVICIEVLGARHLPKNGRGIVCPFVEIEVAGA--EYDSTKQKTEFVVDNGLNPVAKPFHS------NPEFAFLRFVVYEEDMSDQNFLAQATFPVLKTGYRAN------YSELLIKID---IFPAK---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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