Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHHHHCCCSCSSSSSCCCSSSSSSHHHHHHHCCHHHHHHHHCCCCCCCCCSSSSCCCCHHHHHHHHHHHHHCSSSSCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCC MPLKWKTSSPAIWKFPVPVLKTSRSTPLSPAYISLVEEEDQHMKLSLGGSEMGLSSHLQSSKAGPTRIFTSNTHSSVVLQGFDQLRLEGLLCDVTLMPGDTDDAFPVHRVMMASASDYFKAMFTGGMKEQDLMCIKLHGVSKVGLRKIIDFIYTAKLSLNMDNLQDTLEAASFLQILPVLDFCKVFLISGVTLDNCVEVGRIANTYNLTEVDKYVNSFVLKNFPALLSTGEFLKLPFERLAFVLSSNSLKHCTELELFKATCRWLRLEEPRMDFAAKLMKNIRFPLMTPQELINYVQTVDFMRTDNTCVNLLLEASNYQMMPYMQPVMQSDRTA |
1 | 3hqiA | 0.16 | 0.10 | 3.39 | 1.12 | EigenThreader | | NFSFCREEMGEVISTFSSNDKLKGLDSKDYLSLYLLLVSCPKAMESQRAQGKRRGFLLDEANGLLPDQDSVNIS---GADELGGLWENSRFTDCCLCVA--GQEFQAHKAILAARSPVFSAMF-----EHKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHA--------------------------------------------------------------------------------------------------------------- |
2 | 3i3nB | 0.20 | 0.15 | 4.77 | 1.00 | DEthreader | | ------------------------------------------------------------------------SSCSELSWRQNEQRRQGL-FCDITLCFGG-REFRAHRSVLAAATEYFTPL--LSGQFESRSGRVERKGPPDTVEAVIEYYT-GRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKA-ADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE---------- |
3 | 3i3nB | 0.25 | 0.19 | 5.86 | 1.63 | SPARKS-K | | ---------------------------------------------------------------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGR--EFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNEERERYFEELFKLLRLS-QKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE---------- |
4 | 3i3nB | 0.26 | 0.19 | 5.74 | 1.34 | MapAlign | | -------------------------------------------------------------------------HCSELSWRQNEQRRQGLFCDITLCFG--GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEEPGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAA-DIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRAEERERYFEELFKLLRLSQK-PTYLTRHVKPERLVANNEVCVKLVADAVERHALR------------ |
5 | 3i3nB | 0.25 | 0.19 | 5.86 | 1.08 | CEthreader | | ---------------------------------------------------------------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFG--GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERPGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE---------- |
6 | 3i3nB | 0.23 | 0.18 | 5.53 | 1.56 | MUSTER | | ---------------------------------------------------------------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGR--EFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEYYT-GRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHY-TL-SQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE---------- |
7 | 3i3nB | 0.25 | 0.19 | 5.86 | 3.39 | HHsearch | | ---------------------------------------------------------------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFG--GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE---------- |
8 | 6i2mA | 0.24 | 0.14 | 4.38 | 2.35 | FFAS-3D | | ------------------------------------------------------------------------NNSSELIAVINGFRNSGRFCDISIVIND--ERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLTNDNVKYILSTADFLQIGSAITECENYILKNLCSKNCIDFYIYADKYNNKKIESASFNTILQNILRLINDENFKYLTEESMIKILSDDMLNIKNEDFAPLILIKWLESTQ----------------------------------------------------------------- |
9 | 3i3nB | 0.20 | 0.15 | 4.89 | 1.53 | EigenThreader | | ------------------------------------------------------------SEAEDFE---CSSHCSELSWRQNEQRRQGLFCDITLCF--GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKWPEPDTVEAVIEYYTG-RIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH--YTLSQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQKPTYLTRHVKPERLVANNEVCV---KLVADAVERHALRAE------- |
10 | 4ap2A | 0.25 | 0.19 | 5.85 | 1.72 | CNFpred | | -----------------------------------------------------------------AEDFECSSHCSELSWRQNEQRRQGLFCDITLCF---GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALR------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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