Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCHHHHHHHCHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCC LSPDFSNASHVSGMPGPSSGQACSRPAYTKKDTMEWHSQMHSVTLHPSTWLRNGVASLKNWSLKKKAKAARPEEEKIASPKGPLEPPPHASGVPEANSLQEEQKDLPLRAAEGLSPVQSAQRCSSSPFQDSERHCSSPFSLVESRLKLCMKSHEEIEPGSQSSSGSLPWERASASSWTLEDATSPDSGPTVVCDIEDRYLTKDI |
1 | 3f6kA | 0.08 | 0.08 | 3.12 | 0.61 | CEthreader | | AIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKAVCLAKWGSDNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGVKIYSFGLGGRFLFASVMADKDTTRRMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSK |
2 | 6gaoA | 0.09 | 0.08 | 3.00 | 0.55 | EigenThreader | | HMEEIKKQVQVNVDDIRAANIKLDGLGR------QIADISNSISTIESRLGEMDNRLVGISSQVTQLSNSVSQNT-----------QSISSLGDRINAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAALTTRVTTEVTRLDGLINSGQNSIGELSTRLSNVETSMLSGQSKGVGFVGTIDTNYFAYN-------SNGEI |
3 | 7abiK | 0.13 | 0.07 | 2.55 | 0.34 | FFAS-3D | | -------------------------------------------------------EEYEAWKVRELKRIKRDREDRE----------------------ALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQ----------KYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQNFGRSGRTK-- |
4 | 5jcss | 0.09 | 0.08 | 3.21 | 1.47 | SPARKS-K | | AANGF----QLISTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEE-----PSEEDLTHILAQKFPILTNKNVKSIYMNTKFISLNKGAHTRVDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTL |
5 | 2l89A | 0.20 | 0.04 | 1.42 | 0.01 | CNFpred | | --------------------------------------------------------SVKPLLDSEIAKFLGSSKRKSKELIEAYEASKTPPDLKEESSTDLE------------------------------------------------------------------------------------------------------ |
6 | 7kznB | 0.06 | 0.04 | 1.91 | 0.67 | DEthreader | | VLAKEVTE-----------------QDK---------IH-LESAIVTWTQIKNVLK-AD-TEFMEIDLMCKRMMMSCMNRLTNVKRAIIQAFDDCDHSRDLVAFLLWETE--RTR-VDAWCAQVTSKLSDTFQQSALDLICSIYNKVQR---L--A---VEKPLVNTDNVATGILQQSEIDA---------FS-VGF------- |
7 | 5xjcW | 0.05 | 0.05 | 2.46 | 0.89 | MapAlign | | SAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDW |
8 | 2rcjT | 0.15 | 0.15 | 5.09 | 0.79 | MUSTER | | LISDFYPGAVVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRQVTHEGST-VEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALG-LVKDYFPQPVTNSGALTSGVHTFPAVLQSSGLYSLSPSSSLGTQTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVDVSHEDPQV |
9 | 2pffB | 0.15 | 0.14 | 4.62 | 0.60 | HHsearch | | FSAEFTQGLNILELENPSNTPDKDYLLSIPISPLIGVIQLAHYVVTAKLLLKGALVTAVAIAWESFFVSVRKAITVLRCYEPNTSLPPPSPMLSISNLTQEQVQDYVKTNSHLPAGKGAKNLVSRIPFSERKLKFSNRFLPVASPFHLLNKDLVKNN-----------------VSFNAKDIQIPVYDTFDGVDCIIRLPVKWE |
10 | 5nrlH | 0.06 | 0.06 | 2.72 | 0.59 | CEthreader | | VSTKPISAVSLSTVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFRLWDASTHQELLLQAGHSKPIYTGGGDGIINGQLNQILAHRNIVTQVRFSKEDGGKKLVSNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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