>Q9P2E8 (410 residues) MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQA PLPMHGDPQPPGLAANNTLPALGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWG GPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCR CDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAA AILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYR IFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQG PAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRELVMRVTTV |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNTLPALGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRELVMRVTTV |
Prediction | CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCSCCCCCCSSSSSSCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCSSSSSSSSSC |
Confidence | 97413369999975454554211004753431465422200444422231023157999998977789997656676765556777766667643457788777889889964345678888778875445778777655577777667776556666788541652789888641567788862434189999999851986236799536641213677312113330167899999999999999999999999986656788875336899999999999999999999999999999999998414677445312345667665444578877644467655455678888777764333345788874421456555540478974335788862799998629 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNTLPALGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRELVMRVTTV |
Prediction | 54031000010000000000000001301420345431201010002403101123554444445445425434444334424454443353245435453454454453445435574554444344543645445633565455545455555554633200001015654202300404132310335013300433653304104250313414344013233031211000100001113222222201100000010020222100001032333222121000001000000200320241033020232654463565654444455444454344444445344344445444543556433134210020001013403446543564521100010236 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCSCCCCCCSSSSSSCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCSSSSSSSSSC MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNTLPALGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRELVMRVTTV | |||||||||||||||||||
1 | 1vt4I3 | 0.08 | 0.08 | 3.08 | 1.21 | MapAlign | -GGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- | |||||||||||||
2 | 2m6mA | 0.27 | 0.05 | 1.50 | 2.23 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------VAN----------EETDTATFNDDAPSGATCRICRGEATDNPLFHPCKCRGSIKYMHESCLLEWVASKNDVKCDICHYPIQFKT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 1vt4I3 | 0.08 | 0.07 | 2.67 | 0.87 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------- | |||||||||||||
4 | 4cr2Z | 0.09 | 0.08 | 3.20 | 0.58 | EigenThreader | TFQRVCQYMVACVPLLPPPYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYEGVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVFSSAGLDSGFLNLGYCNDKLIVDNDNWVYKTKG---DGMTSAVASIGSIYQWNLQLDKYLYVDEPEVKAGALLGIGISASGVHLGLGIAFA---------GSKALGILYMGQGEQVDDVLETISAIMTSAIEVLVGSCAYTGTGD----VLLIQDLLHRLTLAYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQLTRFSHDADLEVSMNSIFAMGLCGAGTNNARSYYSREQDALFITRLAQGLLHLGKGGLVSPSFMLKHHPKALN--D | |||||||||||||
5 | 2m6mA | 0.28 | 0.05 | 1.49 | 0.51 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------ANEETDTATFNDDAPSGATCRICREATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDKCDICHYPIQF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6w1sK | 0.09 | 0.09 | 3.32 | 0.86 | SPARKS-K | EGDPIVALSWGVKLALHVEKSSSFGEKFSPSLTLFGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLTGGGNIVVAAADGPVKFYKVCVSVVSEKCRIDTEILPSDPNRKDRFPAITHFLARDSLRKEGLPVNNIFQQQPMILKWRILSATNDLDRVSAVALTNTDLKVASDTQFYPGLGLLAFQDGSVHMVHRLSLKAMQLSWTSLALVGIDNHGKLSMLRISPSLKLALQHLLFLLEYCMVTVERLHEEYTRQKLQQVLSTRILAMKASLCKLSRVCDYHTKLFLMAITSTLKSLLR-----------PHFLN-------TPDKSPGDRLAEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQVGDFVLYLLVSL-PNQGSPLRPGHSFLRDGTSLG | |||||||||||||
7 | 1uzrA | 0.15 | 0.04 | 1.31 | 0.67 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRKVASTLLESFLFYSGFYLPMYWSSR--KLTNTADMIRLIIRDEAVHGYYIGYKFQRG-KDYTYELLFELYDNEVEYTQDLYDEVGLTEDVKK-----------------------------------------------FLRYNANKALMNL---------------------- | |||||||||||||
8 | 1st6A | 0.06 | 0.03 | 1.54 | 0.67 | DEthreader | -----------HTRTIES----------QTTEDQILKRDMDTEALQLTSWDEDAWASDTAMRALLIDSKMNQAGDAG-QA--------------KGTDLAAVSLDLTAENRKEAMTNSKQAIAKKIDAAQNWL-ADPNGGSEGEEHIRGIM-------SEAR-VA-------EPKERDILRSLGEISALT----------------ITSNLQSNRAPKAAVKTEGQATKS---L--Q-------------------------------------------RNPGNQAAY-HFETMKNQWIDNVEKMTGLDILLVAKREV-NSED-----PKFREAVKAASDELSK-------------------SYRILGAVAKVREAFQ------N--EVREAEAASIKIR-------- | |||||||||||||
9 | 2pffB | 0.08 | 0.08 | 3.01 | 1.13 | MapAlign | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSKAAQDVWNRADNHFKDTYGFSILDIVQPALTLMEKAAFEDLKSSLADVMSIESLVEVVFYRGMTMQVYVVERVGKRTGWLVEIVNYNVENQQYVAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------- | |||||||||||||
10 | 5az4A | 0.07 | 0.07 | 2.90 | 0.62 | MUSTER | SSRNLYALDWNTKTQRAEDENDTGTTQFYTTSKNSVEVTEKAGSLFNA-QGLNLRDGQGIWVSYADATYSTNKVGVNAFDPNLQQNQTAAFWGTANQKVNLDNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTGVKAVKNKDGSGIDFVNDNADGTTDNMKNINLVVANTNTAAVWNNNNQTFTFNNNGNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLTGGLNAQIITAHKYIYS-VDIGPMYNPDGGPAFQPGANATTRPTEPGSAAYWDAVNGGLLNTNVRTFRTTEDLRELLQRDARYGVDYDGSGTFAAADINQNTADGHFAISNANEQSTVPPNAINGVGNATTTDPKNYSNKQGTVSTNDAFTAIFKAFDGPLVIGNQIKESEQLKLSAFSAGL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |