Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCSCCCCCCHHHHHHHHHHCC MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK |
1 | 5xjcP | 0.97 | 0.47 | 13.10 | 1.42 | FFAS-3D | | -TTAARPTFEPARGGQ---------LSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKN-------------------------------------------------------------------------------------------------------------RDRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK |
2 | 6ybtu | 0.10 | 0.06 | 2.24 | 1.19 | SPARKS-K | | -------------------------------------QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEE---------------------------------------------------------- |
3 | 5mqfR | 1.00 | 0.43 | 11.98 | 1.12 | CNFpred | | ----------------------LSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNR-------------------------------------------------------------------------------------------------------------RRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK |
4 | 5xjcP | 0.99 | 0.48 | 13.33 | 1.13 | MUSTER | | -TTAARPTFEPARGGQ---------LSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDR-------------------------------------------------------------------------------------------------------------WDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK |
5 | 5xjcP | 0.97 | 0.47 | 13.10 | 6.68 | HHsearch | | -TTAARPTFEPARGG-Q--------LSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKN-------------------------------------------------------------------------------------------------------------RDRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK |
6 | 5xjcP | 0.95 | 0.45 | 12.74 | 1.19 | SPARKS-K | | -TTAARPTFEPARGGQLSKQY---------SSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDR-------------------------------------------------------------------------------------------------------------WDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK |
7 | 5gm6S | 0.23 | 0.07 | 2.20 | 3.48 | HHsearch | | --TSHRPQLEARSGAKAAA----YTPTGIEHARLLPGHTTLKYRKRSWRKGTAF-GRGYINDMTKSEYHQEFLHKHVR------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6n7pJ | 0.10 | 0.08 | 3.09 | 1.13 | SPARKS-K | | ---DRIARDNFKSLLREVPIKIKANTRWSDIYPHIKSDPRFLHMLGRNGSSCLDLFLDFVDEQRMYIFAQRSIAQQTLIDQNFEWNDADSDEITKQNIEKVLEN----------DRKFDKVDKEDISLIVDGLIKQRNEKIQQKLQNERRILEQKKHYFWLLLQRTY---TKTGKPKPS-------TW-----------DLKELGESLEYKALGDEDNIRRQIFEDFKP |
9 | 5mpsP | 0.21 | 0.06 | 1.94 | 3.21 | HHsearch | | ---SHRPQLEARSGAKAAA----YTPTGIEHARLLPGHTTLKYRKFSWRKGTAFGRYDMTKSEYHQEFLHKHVR----------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5zigA | 0.05 | 0.05 | 2.30 | 0.57 | CEthreader | | YRFLTHALYDATHRGFFWSVHPDGTPLSRVKKLYGNAFAVYALAAYHTASGDREALTLAWETFDLLEDRGRDRRHGGYYEAFTEDWSTPLPEPLGEGETPAPKTMNTLYFAEDWAPMGGGISFGHDIEATWLLTESVELLYGDPLPEWFLSWIRPVMEETARALDTHGGSLPNEQREDGSVDRARVWWVQAEAFVGFLNAYSLFEEPRYLDHACTVWRFIMDHLVDREG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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