Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCCCCCCHHHHHHHHHHHCCSSSSSSCCCCCCCCHHHHHHHHHHHHHHHHHCCCSSSSSSSSCCCCCCCCHHHHHHHHHHHHCCSSSCCCCCCCCHHHHHHHHHHHHCCCC LFYRNHFGAEELDGDNKDYDAYLSYTKVDPDQWNQETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHGPKCNKLNSKFWKRLQYEMPFK |
1 | 1t3gA | 0.87 | 0.70 | 19.83 | 1.17 | DEthreader | | ----------------KDYDAYLSYTK--VD--T---GEEERFALEILPD-LEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIV-TPNYVV-RR-GWSIFELELRNLVT-GEIKVILIECSELRGIN-YQEVEALKHTIKLLTVIKWHG--P-KCNLSFWKRLQYE-PF- |
2 | 1t3gA | 0.95 | 0.79 | 22.16 | 1.36 | SPARKS-K | | ----------------KDYDAYLSYT-------KVDTGEEERFALEILPD-LEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIV-TPNYVVRRGWSIFELETRLRNL-VTGEIKVILIECSELR-GINYQEVEALKHTIKLLTVIKWHGPKCNKLNSKFWKRLQYEPF-- |
3 | 2q9uA | 0.09 | 0.07 | 2.85 | 0.66 | MapAlign | | --LAIAEYDRWSKGQHCQKKVTVVLDSMY---------GTTHRMALALLDGAR-STGCETVLLE----MTSSDITKVALHTYDSGAVAFASPTLNNTMM----PSVAAALNYVRGLTLKPAFAFGAFGWSNRA----VPDIVAELRDVYGITFKFNYTEELLEQAYNAGVDLGAI- |
4 | 2q9uA | 0.09 | 0.08 | 3.06 | 0.61 | CEthreader | | MGLAIAEYDRWSKGQHCQKKVTVVLDSMY---------GTTHRMALALLDGARS-TGCETVLLEMTSSD----ITKVALHTYDSGAVAFASPTLNNTMMPSVAAALNYVRGLT-LIKGKPAFAFGAFGWSNRAVPDIVAELRDGCKADVGITFKFNYTEELLEQAYNAGVDLGKRA |
5 | 1t3gA | 0.92 | 0.77 | 21.55 | 1.62 | MUSTER | | ----------------KDYDAYLSYTKVDTGE-------EERFALEIL-PDLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIV-TPNYVVRRGWSIFELETRLRNLVT-GEIKVILIECSELR-GINYQEVEALKHTIKLLTVIKWHGPKCNKLNSKFWKRLQYEPF-- |
6 | 3j0aA2 | 0.16 | 0.15 | 4.90 | 2.78 | HHsearch | | LTVTKFRDHQGTEPDMYKYDAYLCFSSKD-----------FTWVQNALLKHLDTQNRFNLCFEERDFVPGENRIANIQDAIWNSRKIVCLVSRHFL-RDGWCLEAFSYAQGRCLSDLNSALIMVVVGSLSQYQL-MKHQSIRGFVQKQQYLRWPED--FQDVGWFLHKLSQQILKK |
7 | 1fyvA | 0.24 | 0.20 | 6.38 | 1.89 | FFAS-3D | | --------PLEELQRNLQFHAFISYSGHD-----------SFWVKNELLPNLEKEGQ--ICLHERNFVPGKSIVENIITCIEKSYKSIFVLSPNFV-QSEWCHYELYFAHHNLFHEGSNSLILILLEPIPQYSIPSSYHKLKS-LARRTYLEWPKE--KSKRGLFWANLRAAINIK |
8 | 1fyvA | 0.19 | 0.16 | 5.31 | 0.65 | EigenThreader | | ------NIPLEELQRNLQFHAFISYS-----------GHDSFWVKNELLPNLEK-EGQICLHE-RNFVPGKSIVENIITCIEKSYKSIFVLSPNFVQSE--WCHYELYFANLFHEGSNSLILILLEPIPQYSIPSSY--HKLKSLARRTYLEW--PKEKSKRGLFWANLRAAINIK |
9 | 1t3gA | 1.00 | 0.86 | 24.18 | 1.53 | CNFpred | | ----------------KDYDAYLSYTKVD-------TGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHGPKCNKLNSKFWKRLQYEMPF- |
10 | 1ua4A | 0.11 | 0.10 | 3.68 | 1.17 | DEthreader | | IEAIKSVP-KV-------KGVLLGYNTN---ELFVEMKLRMGGQAGIMANLLGGVYGVPVIVHVLVPTLEREERESFSEVIKNVQLAILSGLQALTKNYKEPFEIVKSNLEVLN-EREIPVHLEFA-FTPDEKVREEILNVLGMF--YSVGLNVESTVGIGDTISSSAFIGEFSFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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