Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC MSDEGSRGSRLPLALPPASQGCSSGGGGGGSSAGGSGNSRPPRNLQGLLQMAITAGSEEPDPPPEPMSEERRQWLQEAMSAAFRGQREEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLG |
1 | 2x19B | 0.07 | 0.06 | 2.59 | 1.00 | DEthreader | | ------------------AALQDSLFDSSVEIVSAGEN--YPTDEEQFRIYRVDISDTLYYLLIVVPG-IGHPVINSVLPLLANAVSQLLSLISPYIQQLEKAEEI---P--NPSNKLAIVHILGLLSNLFTTLDISNPVVVVQQVFQLIQKVLSWLDAQVVEAVCAIFEKSVKTLLDDFAP-VPQC |
2 | 3qmlC | 0.13 | 0.06 | 2.24 | 2.05 | HHsearch | | -------------------------------------------------------------------------------GDYE--FSSDFKEMRNIIDS-NPTLS--------SQDIARLEDSFDRIMEFAHDYKHGYKIITHE-FALLA-NLSENLPLTLRELSTRVITSCLRNNPPVVEFINESN |
3 | 3gjxA | 0.07 | 0.06 | 2.59 | 1.00 | DEthreader | | -------------------PLNTNLASGQIQVSFCLLMSRMA--SWKNLNTLCWAIGSISMEKRFRAHWKFQVGEVMPFIDEILNNIKYMLLPNQVWDSIIQAVDILK----DPETVKQLGSILKTNVRACKVHPFVIQLG-R-IYLDMLNVYKCLIMRTVKRETLKLISGWVSRSDMVAENFVPPL |
4 | 4rxhB | 0.12 | 0.11 | 3.80 | 0.76 | SPARKS-K | | LSCGALRPLLTLLGDSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSL--------DDEVLIDACWAISYLSDGSNDKIQAVIEIPRRLVELLMHA--------STSVQTPALRSVGNIVGDDVQTQVIINCGALPCLLSLL-SSNKDGIRKEACWTISNITAGNSAQIQSVIDAN |
5 | 4rv1A | 0.11 | 0.11 | 3.82 | 0.50 | MapAlign | | STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLSTDSEVQKEAARALGVEVLVKLLTSTDSEVQKEAARALANISGPDEAIKAIVEVLVKLLT------------STDSEVQKEAARALANIAGPDEAIKAIVDAGGVEVLVK-LLTSTDSEVQKEAARALANIASGPTSAIKAIVDAG |
6 | 6lstA | 0.10 | 0.10 | 3.60 | 0.31 | CEthreader | | ISLPTSISTMVSLLDDMHEPIRDEAILLLMAVVNDSPHVQKLVAFENIFERLFSIIEEEGGLRGSLVVNDCLSLINNILKYNTSNQTLFLENLPKLAHLLSEPISQDEVFFWNDQRIVNINTALDIVSLTVEPTKHQNALLDSSVLMVVLRLAFFHNPKKVRPVALLTAANMVRSNEHAQLEFSKID |
7 | 3nowA | 0.15 | 0.14 | 4.85 | 0.65 | MUSTER | | LDQKHENCVST-FCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRT------ISGAARDGVIELITRNVHYTALEIRGLCRLLDVCSE-LEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARF-QIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVARE |
8 | 3qmlC1 | 0.12 | 0.06 | 2.10 | 2.00 | HHsearch | | -------------------------------------------------------------------------------GDYE--FSSDFKEMRNIIDS-NPTLS--------SQDIARLEDSFDRIMEFAHDYKHGYKIITHE-FALLAN-LSLNLPLTLRELSTRVITSCLRNNPPVVEFINESF |
9 | 1xqrA1 | 0.77 | 0.41 | 11.65 | 0.90 | FFAS-3D | | ------------------------------------------------------------------------------------RGQRGEVEQKSCLRVLSQPPPTAGEAEQAA-DQQEREGALELLADLCEN-DNAADFCQLSGHLLVGR-YLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLG |
10 | 6zwmE | 0.07 | 0.06 | 2.66 | 0.70 | EigenThreader | | RVLLRANVEFFNNWGIELLVTQLHDKNKTISSEALDILDEACEDKANLHALIQM------KPALSHLGDKGLLLLLRFLSIQLVHHKTGCHLLEVLCRNVRTPDLDK------WEEIKKLKASLWALGNIGSSNWGLNLLQEENVIPDILKLAKQCEVLSIRGTCVYVLGLI-AKTKQGCDILKCHN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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