Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCCCCCCHHHCCCCSSSCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCC MASKKLGADFHGTFSYLDDVPFKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEEIKKIEEAEREAECKIAEAEAKVNSKSGPEGDSKMSFSKTHSTATMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHIKADFNLADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDNNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSNQKTAKLASTFHSTSCLRNGTFQNSLKPSTQSSASELNGHHTLGLSALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPNFSVSQVPNMPSCPQAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS |
1 | 4ae4A | 0.78 | 0.16 | 4.62 | 1.06 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHSPSERQCVETVV-NGYSYECVLRA-KAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEHQCSEEKEFLQLSKF-----KEGFELKDIKEVLLLHNNDQDNALEDLA-RA--- |
2 | 5yfpH | 0.09 | 0.08 | 3.00 | 1.13 | SPARKS-K | | ----------NSTSLRKMLANPHFNAKDFVHDKLGNASAITIDKFTSNLTDLSIQVEVKLNINKSYNEIMTVNNDLNVAMLELKRVRANINDLNEVLDQCTIAEKRLQLQDQIDQE--------------------RMRRDRSSVLILEKFWD----------------------------TELDQLFKNVEGAQKFINSTKGRHILMNSANMELNTTTGKPLQMVQIFILNDLVLIADKSRDK-------QNDFIVSQCYPLKDVT------------VTQEEFSTKRLLFKFSNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFHVEENSKRIRESFRYLQSTQQTPGRENNRSPNKNKRRSMGGSITPDMSSTKFLDEGVEEIDIELESAVETLLDIEMLLNLISLKIEQRREASSKLSQSISGTENMIKLGLPEQALDLFLQNRSYLTQLAVIRFQTIKKTVEDFFKEAKISSILVDWCSDEVDNHFKLIDKQLLN |
3 | 4ae4A | 0.96 | 0.22 | 6.03 | 1.08 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMSPSERQCVETVVNMGYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARA--- |
4 | 6lewA | 0.10 | 0.09 | 3.29 | 1.24 | MapAlign | | ------------------------------------------LEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHAGGKQALETVQRLLPVLCQAHGLTPQQV--------------------VAIASNNGGKQALETVQRGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGKQALETVQRLLPHGLTPEQVVAIASNGGG-KQALETVQRLLPVLCQHGLTPEQVVAIASHDGG-KQALETVQRLLPVLCAHGLTPQQVVAIAS-NGGGRPALELGGRPALDAV |
5 | 4ae4A | 0.95 | 0.20 | 5.59 | 2.37 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHSPSERQCVETVVN-GYSYECVLRA-KAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALE-HQCSEEK--EFLQL-SKFKE-GFELKDIKEVLLLHNNDQDNALEDL-ARA--- |
6 | 1vt4I3 | 0.06 | 0.06 | 2.50 | 1.24 | MapAlign | | --FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIGSILNTLQQLKFYKPYIKYERLVNAILDFAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGG |
7 | 4dbgB | 0.18 | 0.04 | 1.36 | 1.43 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKMREEGLQLVSEGEAAGACPEEIFSALQYSGT--EVPLQWLRVLEMVAELAFSCQEARRAWLDRHGNLDEAVEECRKVQELQSLGFPEEGSLQALFQHGGDVSRALTELQRQRLEP |
8 | 3ugmA1 | 0.09 | 0.06 | 2.47 | 1.18 | MapAlign | | --------------------------------------------DQVVAIASNGGGKQALETVQRLLPVLLTPDQVVAIAGKQALETVQRL-------------------------------------------------------------LPVLCQAHGLTQVQVVAIASNIGGKQALETVQ-----RLLPVLCQAHGLTPAQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQV-VAIASNGGGKQALETVQRLLPGLTQEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGL-----------TPAQVVAIASNIGGKQALETVQRLLPVLCQDHGLTLAQVVAIASNGKQALETVQRLLPVLLTQDQVVAIASNIGG-KQALETVQRLLPVLCQDHLTPDQVVAIASNIGG-KQALETVQRLLPVLCDHGLTLDQVVAIAS-NGG-KQALETVQRLLPVLC |
9 | 2lbcA | 0.17 | 0.04 | 1.18 | 1.16 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIDESSVMQLAEMGFPLEACRKAVYFTGNGAEVAFNWIIVHMEEPDF--AE-----PLTMPGYGGLDNQPPEEIVAIITSMGFQRNQAIQALRATNNNLERALDWIFSHPEFE |
10 | 4ae4A | 0.20 | 0.04 | 1.33 | 1.16 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHSPSERQCVE-------------------------------------------------TVVN-GYSYECVLRA-KA-AGANIEQI----LDYLHGQLCEKGFDPLLVEEALE-HQCSEEK--EFLQL-SKFKE-GFELKDIKEVLLLHNNDQDNALEDL-ARA------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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