Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC MPNSERHGGKKDGSGGASGTLQPSSGGGSSNSRERHRLVSKHKRHKSKHSKDMGLVTPEAASLGTVIKPLVEYDDISSDSDTFSDDMAFKLDRRENDERRGSDRSDRLHKHRHHQHRRSRDLLKAKQTEKEKSTTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIGLADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEATSQQQDSETMAPEESLKEAPSAPVILPSAEQTTLEASSTPADMQNILAVLLSQLMKTQEPAGSLEENNSDKNSGPQGPRRTP |
1 | 5zliA2 | 0.07 | 0.06 | 2.58 | 0.54 | CEthreader | | DTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVEAADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAAFT---------NASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSN------PYLAFAAILMAGMDGVKNKIDPGEAMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYSC--------- |
2 | 6gmhQ | 0.07 | 0.07 | 2.83 | 0.68 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKATTSYNLARLYEAMYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAK---QEWGPGQKKFERILKQPSTQSDTYSM |
3 | 6pmiF | 0.15 | 0.10 | 3.27 | 0.55 | FFAS-3D | | ------------------NSLYTAEG-----VMDKHSLWQRYVPLVRHEALRLSVELDDLLQAGGILNAVERYD--ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETFSYDEWREEHGDSIELVTDDHQRENPLQQLLDRVMEAIETLPEREKLVLT--LYYQEELNLKEIGAVLEV--GESRVSQLHS--QAIKRLRTKLGK------------------------------------------------------------------------------- |
4 | 5yz0C | 0.12 | 0.11 | 4.04 | 1.05 | SPARKS-K | | -----MAGTSAPGSKRRSEPPAPRPGPPPGTPSKRARGFSAAAADPDDPFGAHGDFTADDLEELDTLASQASQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRELEVLQAQYMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERARKNPSVVIKPEACSPQFGKTSFPTANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSQEEAQKSFVDSWRQRSNTQGSILINLLLKQPLIPGSSLSSSSESPAGTPLQPPGF |
5 | 4uqiB | 0.21 | 0.05 | 1.44 | 0.49 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNPQNINKLLTALNECTWGQIFILDCLSNYN-DREAQSICERVTPRLSH------------------------------------------ANSAVVLSAVKVLMKFLE-------------------------- |
6 | 5y81A | 0.06 | 0.05 | 2.06 | 0.67 | DEthreader | | --------------VAD--------------ALTVQIMSAKLLLNLVERILKLGK--KKLMIIIDSYMRFK-LN-------------LKTIHFDLFHCYLPLVAQSTLVRLFKLLFYIRLHERELYVEMPLVALP-DPTDL-TEKTELDI------------FKINGMPEDVPLSVTPGIQVMYSNQENLFRLLESVF-------------D-LLNNLLDHFCLLQVNTTLNSFPVFLKKITGLLSLICLSLLANIRILKEL--N---GLKPLLMNGRKLLDHLFDLLKVMLLERKLRLQL-DSPFRTP |
7 | 5zliA | 0.07 | 0.06 | 2.70 | 0.82 | MapAlign | | DLVRYFIDPFSADVSVVVFCDVYDVYKNQPYEPRSIAKKALQHLKDSNEFFIFDSIKIKDASNSQYYEVDSEEGEWNRDRSFENGVNKQGGYMPVPPTDTMMDIRTEIVKVLNEAADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLR------HARGLAAFT---NASTNSYKRLIPGYEAPSILTYSANNRSAS-------VRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGEAMDINLFKLTLDEIREKGI |
8 | 5yz0C | 0.17 | 0.16 | 5.31 | 0.66 | MUSTER | | MAGTSAPGSKR-----RSEPPAPRPGPPPGTGSKRARGFSAAAAPDPDDPFELDTLASQALSQCPAAARDVSSRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKL-----QTSERANKLAAPSVSHVSPRKNPSVVIKPEACSPQFGKTSFPTKES-----SANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIK-QEEAQKSFVDSWRQRSNTQGS-KQP |
9 | 2cfxA1 | 0.15 | 0.03 | 0.87 | 0.63 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKLDQIDLNIIE-ELKKDSRLSMRELGRKIKLS-PPSVTERVRQLESFGIIKQYT---------------------------------------------------------------------------------- |
10 | 5zliA | 0.08 | 0.07 | 2.84 | 0.52 | CEthreader | | DTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVEAADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAAFTNASTNSYKRLIPGYEAPSILT--------YSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNK-------IDPGEAMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYSC--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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