Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCSSSSSCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EAHSEMGSTEILEKETPENLSNGTSSNVEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAIMLLNTDLHGHVNIGKKMTCQEFIANLQGVNEGVDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSESTEEKANGTHPKTISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASKATDYEKKPNVFKLKTADWRVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQITTELAEHRSYPPDKKVKAKDVDEYKLKDHYLEFEKTRYEMYVSILKEGGKELLSNDESEAAGLKKSHSSPSLNPDTSPITAKVKRNVSERKDHRPETPSIKQKVT |
1 | 4c0aA | 0.20 | 0.14 | 4.33 | 2.46 | SPARKS-K | | YRIGLNLFNKKPEKGVQYLIERGFVPDT--PVGVAHFLLQRKGLSRQMIGEFLGNQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGKAQKVERLIEAFSQRYCICNPGVFRNPDTIFILAFAIILLNTDMYSP-NVKRKMKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVSQVQKVEKLIVGLGCVLSLPHRRLVCYCRLFEVPDP----------------------NKPQKLG--LHQREIFLFNDLLVVTKIFQKKKNSVTY--SFRQSFSLYG-MQVLLFENQYYPNGIRLTSSVPVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQ------------------------------------------------------------------------------------------------------------------------------------- |
2 | 6bbpA | 0.21 | 0.18 | 5.78 | 1.07 | CEthreader | | HHGSTTQRNKQIAMGRKKFNMDPKKGLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNH-NVRDKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGND---------------------------------LTHTFFNPDREGWLLKL----------GGRVKTWKRRWFILTDNCLYYFEYTTDKE-------PRGIIPLENLSIREV-EDPRKPNCFELYNGNHVVYRISAPSPEEKEEWMKSIKASI---SRDPFYDMLATRKRRIANKKGKVLSKIFGNKEMR---------------ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD |
3 | 6bbpA | 0.23 | 0.20 | 6.35 | 1.69 | MUSTER | | HHHHHHGSTTDPKKGIQFLIENDLLQS--SPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHN-VRDKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDD-----------------------------GNDLTHTFFNPD----REGWLLKL----------GGRVKTWKRRWFILTDNCLYYFEYTTDKE-------PRGIIPLENLSIREVED-PRKPNCFELYNPSHVVYRISAPSPEEKEEWMKSIKAS----SRDPFYDMLATRKRRIANKKGKVLSIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVET-DKIRPLWRHYYTGRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDVQPSCATSGDGLY |
4 | 6bbpA | 0.25 | 0.21 | 6.40 | 4.10 | HHsearch | | -----MGHHHHHKKGIQFLIENDLLQS--SPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNH-NVRDKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDL---------------TH------TFFNP------------DREGWLLKL------GGR----VKTWKRRWFILTDNCLYYFEYTTDK-------EPRGIIPLENLSIREVEDP-RKPNCFELYNADGRVYRISAPSPEEKEEWMKSIK---ASISRDPFYDMLATRKRRIANKKGKVLSKGNK-EM----------------RILMLGLDAAGKTTILYKLKLGQSVVGFNVETVDKIRPLWRHYYTGTIDQELHRIINDREMRDAIILIFA-----NKQDLPDAMKHEIQELTRIRDRNWQ |
5 | 4c0aA | 0.22 | 0.14 | 4.35 | 2.24 | FFAS-3D | | -------------------IERGFVPD--TPVGVAHFLLQRKGLSRQMIGEFLGNQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGKAQKVERLIEAFSQRYCICNPGVFRNPDTIFILAFAIILLNTDMYSPNVPERKMKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVSQVQKVEKLIVGLGCVLSLPHRRLV-------------------------CYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVT-YSFRQSFSLYGM-QVLLFENQYYPNGIRLTSSIKVLINFNAPNPQDRKKFTDDLR---------------------------------ESIAEVQEMEKH--RIESELEKQ-------------------------------------------------------------------------------------------------- |
6 | 6bbpA | 0.21 | 0.12 | 3.86 | 0.67 | DEthreader | | -KKFNMDPKKGIQFLI-E--------LQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHN-HNVRDKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTH------FFNPDLTD-LYYF--------EPRG-I--IP-LENLS---------------------KGQVIKACVVEGNHVVYR-ISAPS-------------------------------------------LATRKRRIANKKGKVLSKIF-GNK---------------------EMRIL----------------------------------------------------------------YKLKLGQ-S-VTTIPTVGGLDRFVVFANK-DL----------------------- |
7 | 6bbpA | 0.21 | 0.16 | 5.22 | 1.55 | MapAlign | | NKQIAMGRKKFNMDPKKGIQFLIENDLLQSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLH-NHNVRDKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDG---------------------------------NDLTHTFFNPDREGWLLKLG----------GRVKTWKRRWFILTDNCLYYFEYTTD-------KEPRGIIPLENLSIREV-EDPRKPNCFELYIKAHVVYRISAPSPEEKEEWMKSIKASITIPTVGFNVETVTYKNVKFNVWDVGGLDKI-RPLWRHYVVDCRDRIDEARQELHRIIIFANKQDLPDAMKPHEIQELGLTPSCASGDGLYEGLTWLTSNY--------------------------------------------------- |
8 | 4c0aA | 0.16 | 0.11 | 3.51 | 1.37 | EigenThreader | | -FSNDVIRKRHYRIGLNLFNKKFVPDTPVGVAHFLLQR--KGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGKAQKVERLIEAFSQRYCICNRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVSQVQKVEKLI----------------VGLG-----CVLSLPHRRLVCYCRLFEV----PDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTY-SFRQSFSLYGMQVLNQYY----PNGIRLTSSVPGAINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQ------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2r0dA | 0.29 | 0.16 | 4.94 | 1.96 | CNFpred | | -----------------------------SPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNH-NVRDKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGND-----------------------------LTHTFFNP----DREGWLLKLG----------GRVKTWKRRWFILTDNCLYYFEYTTDKE-------PRGIIPLENLSIREVE-DPRKPNCFELYNP-HVVYRISAPSPEEKEEWMKSIKASISR----------------------------------DPFYDMLATRKRRIA---------------------------------------------------------------------------------------------------- |
10 | 4c0aA | 0.23 | 0.11 | 3.36 | 0.67 | DEthreader | | -LNLFKKPEKGVQYLIE---------VPDTPVGVAHFLLQRKGLSRQMIGEFLGNRKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGKAQKVERLIEAFSQRYCICNPGVVFNPDTIFILAFAIILLNTDMYSPNVKPRKMKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVSQVVEKLIVGLGCVL-LRLFNDL-----------LYGMQVLLF----------------------------------------V--PGAD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------IK-VLI-NFNAPNP---------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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