Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHCCCCCHHHHHHHCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHCCCCCCSSSSCCCCCCCCC SIQKDLTALLTGDTQAEISQIMNNGRKGAVCVQEPSCPLASLGSSAVTCHSAGSVGFLKEQRSALGREHPGGCDRSSSMGRPGRVKHVEFQGVEILWTGGDKRETQHPIDFETSLQRTASPDSKESSKVPRHLISSAGLCNSSSLTENVWDESWKAPSERPGTSSGTFSPVRLDESGEDEVFLQENKQHLEKTPKPERDRERISEQEEHVKGEDEDILGPGYTEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQ |
1 | 1vt4I | 0.08 | 0.08 | 3.17 | 1.39 | MapAlign | | --YSHIGHHLKNIEHPERMTLFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 2pffB | 0.20 | 0.18 | 5.86 | 1.30 | HHsearch | | LQENDTTLVKTKELIKNYITARIMAKRPFDKK------SNSALFRAVGEGNAQLVAIFGGQGNTYQTYHVLVGDTLSELRTTLDAEKVFTQGLNILWLENP--SNTPDKDY-LLSIPISCPLIVVTAKLPGELRSGLVTA--VAIAE---TDSWESVSVRKAITVLFFIGVRCYEAYLPPSILEDSLENNEGVPSPMLSISNLTQEQVQYVNKT----------NSHLPAGKQVEISLVNGALYGLNDQSRIPFSERKLKFSFLPVASPFHSH |
3 | 6vbu1 | 0.08 | 0.08 | 3.08 | 0.62 | CEthreader | | SLSDSMANIHTFSACLALADFHGDGEYKLAMGDLGPDGRQPRLKVLKGHTLVSQKPLPDLPAAAVTFLMASHEPRTPALAIASGPCVYVYKNLKPYFKFSLPSLPRRQTVITTMTTLKKNLADEDAVSGTENKELLVLDPEAFTILAKMSLPSVPAFLEASGQFDVEFRLAAACRNGSIYILRRDSKRPKYCIELGAQPVGLVGVHKVLVVGSNQDSLHYKGKRLWTVQMPAAILAMNLLLQAVMAALANEEVRIYHDKVLLNVIRTPEAVTS |
4 | 7kogB | 0.05 | 0.05 | 2.25 | 0.63 | EigenThreader | | EAEAALEQEENKVLRSQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDH---------ANKANSEAQKTIKKYQQQLKDVQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELGDAHEQINELAAQATSASAAKRKLEGELQTLHADLDELLNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALETQIKELQIRLDEAETNALKGGK |
5 | 3cnfB | 0.11 | 0.11 | 3.81 | 0.34 | FFAS-3D | | QIRHAIERIAQSTDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPRIARR-FNGVRIM---------YLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASLDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEASG-----EDMRLIYPLQPISVARSMRAIVNHNEVDRTGTLSR |
6 | 5yfpH | 0.10 | 0.10 | 3.65 | 0.97 | SPARKS-K | | DLSIQVQEEVKLNINKSYNEIMTVNNDLNVAMLELKRVRANINDLNEVLDQCTKIAEKRLQLQDQIDQERMRRDRSSVLILEKFWDDQLFKNVEGAQKFINSTKGRHILMNSANWMELNTTTGKPLQMVQIFILNDLADKSRDKQNDFIVSQCYDVTVTQEEFSTKRLL--FKFSNSNSSLYECRDADVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTRRSMGGSITPDMSSTAQRLKFLDEGVEEIDIELARLR----FESAVETLLDI |
7 | 2oefA | 0.12 | 0.03 | 1.03 | 0.31 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLARQTVYVKGKDGQPDAEKRVLLLRESA---------QCPKADMESFQDINKYSFFNT---NNLWIRLPVLLETM------------------- |
8 | 6lr0U | 0.10 | 0.07 | 2.58 | 0.67 | DEthreader | | --------------------------DKSYNN-K-F-I-MFVGSLCAFLHGIAQVGYQICFWVIAA------------QIQKMRKYFIMFSVGLNRFDININ---A---------------------------IQRMTSTICGFLG-IIVSPLIGIGGFVWCLIFLYALAFGLVLEGEYTPTLVQIFLSVIVG-LNL-GN-ASPCLEAFATGRAA-ATSIFETIDRKPI-DCP--QLQFYIVEQLDMASVALTVRAADTII---AGIGKERRI |
9 | 7b0yA | 0.05 | 0.05 | 2.37 | 0.95 | MapAlign | | --LTHKLADIVKINNQLRRNEQIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGLVRRGNSQYPGAKYIIRDNGDRIVERHLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFRTLPHFIKDDYGPESRGFVENSYL- |
10 | 2atyA | 0.10 | 0.10 | 3.64 | 0.60 | MUSTER | | PIAVGTVIRYTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSFSMNGNKSVNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPK-VVVDISKDDPEVQTAQTQPREEQFNSTFRSVSEAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVS-MITDFFPED-ITVWNGQPA--ENYKNTQPIMNTNESYFVYSKLN--VQK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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