Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCSSSCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQPPPTDTTHATHRKAGGTDAPSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKSQAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQDRRDNQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHRRVTDHLGVVYYVGDTFSEEYTGSSLKTVERNVEDDYIANLRNNCWKEKQQKEGLLYRARYFGDTDMYHRAQKMGTPSCSRLSEVQASLHG |
1 | 6z5nA | 0.48 | 0.13 | 3.80 | 1.40 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANSYTFHGDPHAMFAEFFGGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 6u3rA | 0.29 | 0.14 | 4.39 | 1.10 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------GMVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPEEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSF-------DFFEDPFEDFFGNRRGPRGGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDNK--------------------------------------------------------------------------- |
3 | 6u3rA | 0.32 | 0.15 | 4.50 | 2.48 | HHsearch | | ----------------------------------------------------------------------------------------------------------GMVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPEEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGHFDSPFEFGF-TFRNPDDVFREFFGRDPFSFDFDPFEDFFGNRRG-------PRGGMGNF---KS-----ISTSTKMVNGRKITTKRIVE--NGQEREELKSLT-INGKEQLLRL---DNK---------------------------------------------------------------------- |
4 | 2xm6A | 0.06 | 0.05 | 2.33 | 0.62 | CEthreader | | LAAEQGRDSGQQSMGDAYFEGDDYVMAREWYSKAAEQG-NVWSCNQLGYMYSRGLGVERNDAIRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLPLKALEWYRKSAEQ---------GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAWARMQKLKAQSAVKT------------------------------- |
5 | 4ui9O | 0.08 | 0.07 | 2.88 | 0.82 | EigenThreader | | EGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRISNDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLLKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMAL--------------QQAQMLLSMNSLEQQNNFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGADSLVTGITALNS------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGRAMFLVAKCQVASAASY-----DQPKKAEALEAAIENLNEAKNYFAKVDC |
6 | 6u3rA | 0.45 | 0.13 | 3.82 | 1.37 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPEEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFS---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4j80A | 0.20 | 0.14 | 4.52 | 1.00 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------AAKKDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAV-SDPEKRRIYDTYGTTEAPPPPPPGGYDFSGFDVEDFS---EFFQELFGPGLFGKGRDLRAELPLTLEEAFHGGERVVEVAGRRVSVRPPGVREGSVIRVPGGGQGNPPGDLLLVVRLPHPVFRLEGQDLYATLDVPAPIAVVGGKVRATLEGPVEVAVPPRTQAGRKRLKGGGFPGPAGRGDLYLEVRITIPERLTPEEEALWKKLAEAYYAR- |
8 | 4a1sA | 0.10 | 0.07 | 2.63 | 0.91 | CNFpred | | ---GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTLRTLSAIYSQLGNAY--------------------------------------FYLGDYNKAMQYHKHDLTLAKSMN-----DRLGEAKSSGNLGNTLKVMG----RFDEAAICCERHLTLARRLSEGRALYNLGNVYHAKGKHLGQ----------GKFGDDVKEALTRA------------------------------VEFYQENLKLMRGAQGRACGNLGNTYYLLGDFQA-----------------AIEHHQLRIAREFGDRAAERRANSNLGNSHIFLG--QFEDAAEHYKRTLALAVELGEREVEAQS-------CYSLGNTYTLLHE |
9 | 5gm6B | 0.05 | 0.03 | 1.54 | 0.67 | DEthreader | | ----------------------RQLKENEE-------------------NEDGNIEERKEKIQHELGINI----------QYDEIHIP-APSKPVIDYELKEISL-CQEAF--QVFH-------AAFEGDSN-ML--I-C-APTGSGKTNIALLTVLKALS--H-HYNPTKKLNLRLAFLG---IKVA-QIDETQVLVSTPEKW----------FVHSRTSTVIKGTDVYSWREGALDIFIHQNAGRLLRACKATHGSLEPFTP-IH-KGDALLKLSKR-----------SRLEL------------------PVDFQNDLKDILEKVVPLINVVVDILS--A---N--GY-LNATTAMDLAQMLIQGVQPHFQL |
10 | 6af0A | 0.08 | 0.08 | 3.08 | 0.89 | MapAlign | | TDVNAIASDGWYLLARKEHYDGNLERASDYYRRADDARGYLPAKFGAAQLSVLKKKAISLLEGVRSAWKDPKRNLSPDAAVLLNLARLYESESPDKALQCLQQVEQLLLPPQLLNIGCFYSKHRLATEFFQAALDSCAISQTENDLIDALLTTIPFNLGRSEGDKAIETYEQLNPNKEGPDAVAKLYQENPSDLEVRGLYGWFLSKVYKHTLQSYDKHDRYALVGMGNLHLMAAREMRRETEQDRQKRSAAYNRAVEFFDKALQLLQIFIKVRETIQDAHVYVNMGYAELRQFKASYALNKGRAERNLDAYKMALDQAKKNSFQLEEAAEGLEEAIKILDEIAAPYPRHDIEQRANMARQKQLERALASQREY-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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