Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
| | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCSSSSSSCCCCCCSSSSSSSSSSCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCSSCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCSSSSSSCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCSSSSSSSSCCCCCCCCCCCCSSSSSSSSSCCCCSSSSSCCCCCCCCCSSSSSCCCCCSSSSSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSSSSSSSSSSCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCSSSSCCSSSSSSSCCCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCSSSSSSSSSSCCCCHHHHHHHHHCCCCCSSCCCCCSSCCCCCCCCCCCSCCCSSSSCSSSSSSSSSSSCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC MAETVWSTDTGEAVYRSRDPVRNLRLRVHLQRITSSNFLHYQPAAELGKDLIDLATFRPQPTASGHRPEEDEEEEIVIGWQEKLFSQFEVDLYQNETACQSPLDYQYRQEILKLENSGGKKNRRIFTYTDSDRYTNLEEHCQRMTTAASEVPSFLVERMANVRRRRQDRRGMEGGILKSRIVTWEPSEEFVRNNHVINTPLQTMHIMADLGPYKKLGYKKYEHVLCTLKVDSNGVITVKPDFTGLKGPYRIETEGEKQELWKYTIDNVSPHAQPEEEERERRVFKDLYGRHKEYLSSLVGTDFEMTVPGALRLFVNGEVVSAQGYEYDNLYVHFFVELPTAHWSSPAFQQLSGVTQTCTTKSLAMDKVAHFSYPFTFEAFFLHEDESSDALPEWPVLYCEVLSLDFWQRYRVEGYGAVVLPATPGSHTLTVSTWRPVELGTVAELRRFFIGGSLELEDLSYVRIPGSFKGERLSRFGLRTETTGTVTFRLHCLQQSRAFMESSSLQKRMRSVLDRLEGFSQQSSIHNVLEAFRRARRRMQEARESLPQDLVSPSGTLVS |
1 | 6kz8A1 | 0.09 | 0.02 | 0.81 | 0.54 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQHLLHGTLHATIYEVDALHETQLYATIDLQ---------------KARVGRTRKIKNEPKNPKWYESFHIYCAHLAS-----------DIIFTVKDDNPIGATLI-GRAYIPVDQVINGEEVDQWVEI-------------------------------------LDNDRNPIQGGSKIHVKLQYFHVEED------------------------------------------------------------- |
2 | 2o36A | 0.06 | 0.05 | 2.05 | 0.68 | EigenThreader | | -----------------------------------LRWDLSAQQIEERTRELIEQTKRVYDQVGTQEFEDVS-----------YESTQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSM------REDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMLKVTLKGF------HTHADYVLE-------------------MNMAKTKLKPLGEQERAVILELKRAECERRGLPFDGRIRAYFPFHHELYTARDA---ASGEVVGKFYLDLYPREGKYGH--AACFGLQPGCL--RQDGSRQIAIA---AMVANFTKPTADAPSLLQFGHVMHQLCSQAEFAMFSGTH-----VETDF------------VEAPSQMLENWVWEQEPLLRMS-----RHYRTGSA-----------------------------VPRELLEKLIESRQANTGLFNLRQIVLAKVDQALHEYARLCQEILG---VPATPGTNM |
3 | 2zu0A | 0.13 | 0.08 | 2.82 | 0.57 | FFAS-3D | | --------------------------------------------------------------------------------------QQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHEN--------WKYTPLEGLINSQFVSIAGEISPQQRDALLSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVLMHITQGVAGEEVNTAHYRHHLDLAEGAEATVSLNDARHFTGARFTINVAANAHLQHILAFENPLS---------------------------------------HHFAHNDLLLAE----DATAFSHSFLLGGA-----------VLRHNTSTQLNGENSTLRINSLCDTRTWLEHNKGFCN-----SRQLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNL--------------LMGKLAEVDTKPQLEI---YADDVKCSHG---ATVGRI--------------DDEQIFYLRSRGINQQDAQQMYAFAAELTEALEGLKQQVLAIGQRLP------------ |
4 | 4r04A3 | 0.10 | 0.08 | 2.80 | 0.69 | SPARKS-K | | LKKLNLDEKYLISFEDISKNNSTYSVRFINVYVETEKEIFSKYSEHITKEISTIKNSIITDVNGQLDHTSQVN-----TLNAAFFIQSLIDYSSN-KDVLNDLSTSVKVQLYAQLFSTG-----LNTIYDSIQLVNVNDTINVLPTITEGIPINLGAAIKELLDEHDP----------------LLKKELEAKVG----------VLAIDFIAEDIMKDDINTITGKYYVDNN----------TDKSIDFSISLVSKNQVKVNGLYLN--------ESVYSSYLDFVKNSMNLFLDNISFWKLFGFENINFVIDKYFTLVGKTN----LGYVEFICD---------NNKNIDIYFGEWKT-----SSSKSTIFSGNVVVEPIYNPDTGEDIST--SLDFSLYGIDRYINK-------VLIAPDLYTSLININT------------------NYYSNEEIIVLNPNTFHKKNLDSSSEYKWSTEGDFILVRYLEERIKGILSNTQSFNKMSIDFKDIKKLS----LGYIMSNFKSFNS---------------------- |
5 | 3qdeA | 0.11 | 0.05 | 1.89 | 0.97 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFSLISNT------------AGGYCFYRDARLRRITRYRYNN-GRYFYIYDN---GDFWSPGWSPVKREL----------------------------ESYEC-----RHGLGYTKIAGKR----NGIKAEVTFFVPL---------NYNGEVQKLILKNEGDKKKITLFSFIEFCLWNAYDMTNFQRNFSTGEVEIEVIYHKTEYRERRNHYAFYSVNA-------KISGFDSD--------RDSFIGLYNGFDAPQAVKSNNSVAWAPIASHSIEIELNEQKEYVFIIGYVENKD----EEKWESKGVINKKKAYEMINTVEKVDKAFEELKSYWNALLSKYFLESHDEKLNRMV |
6 | 6ar6A | 0.06 | 0.03 | 1.53 | 0.67 | DEthreader | | ------------------------YNKFFR----------------------------------------------FPDDAAKAESLGEDDNLDFSQNI---QLQ-GD--------------------------VLFQKAYYYNPGDG-PIISDRPKIKLTFI--FAGFDVDS-----EIEAAIDLAKEDISPKSISIIVSANQYEVRELLDH--S--GEWINKIIISKEYITVSKNLTLLQEIRNNSNS-D---------EEKMLTECEINVISNIDTQIVEERIEE-AKNLTSD-INYIKDEFLIESIEIKIKGTIF------------DTVNGKLVKK-VNL----DTTH-----------------------AAFIQIENSSK-DETIDSPIIAIIDG-------------AAIKELSE-----IEIGIMA----EGILSTLS------------NG-NGFVSL--EVDLLKSYKLLPFTNITNSIEYFIKFTNYIVEPVINFINITVNINFSDKQNAASIGEYFNVLQTGYFAPANTLDEN------------- |
7 | 5dl6A | 0.03 | 0.02 | 1.03 | 0.92 | MapAlign | | ---------------------GSFINSSVELTTR-----------------NFYFDRDYQYPAAKDWTQGFILKANSGYTFGLDVLATAG-FKADAEHGGTGNLRDEPADS---------YGEIGVTAKA------------------------------------------------------------------KMSQTELRIGTLMPMNASPARLLPQTYRGISLTSKDIKDFLQAAY------LDKVNHRD-STNYEKI----------------------------------------------KISVNGRFQYKINDTTNFSSQLRYYRSRDDGQAKAG---LVDNDLYHAHFELKHQNHKFIFGTFQTAFPYLTGGETPGEFLNPKEKAYSFRYEYFKEYVPGCFMTRYTTGHNIYAPNLGLKERETDFDLGY-----TVQSGWLKNLG--------------------LRARYAIYDNNMLSTANIKPVNET----------------------------------------------------------- |
8 | 4r04A3 | 0.10 | 0.08 | 3.15 | 0.62 | MUSTER | | EPVKNIIHNS------IDDLIDEFNL---LENVSDELYELKKLNNLDEKYLISFEDISKNNSTYSVRINKSNGESVYVETEKEIFSTKEISTIKNHTSQVNTLNAAFFIQSLIDYSSNKDVLNDLSTSVK----VQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINPTITEGIPIVSTILDGINLGAAIKELLDEHDPLLKKELEAKVGVLAIDFIAEDINVFMKINTI-TGKYYVD---NNTDKSIDFSISLVSKNQVKVNGLYLNESVYSSYLDFVKNSHHNTSNFMNLFLDNISFWKLFGFENINFVIDKYFTLVGKTN----LGYVEFICD-NNKNIDIYFGEWKTSSSKSTIFSGNGR----------NVVVEPIYNPDTGEDIST----SLDFSYEPLYGIDRYIN--KVLIAPDLYTSLININ---TNYYSN-EYYPEIIVLNPNTFHKKVNINLDSSSFEYKWSTEGSDFILVRYLEESNKKILQKIRIKGILSNTQSFNKMSIDFKDIKKLS-LGYIMSNFKSFNS---------------------- |
9 | 4ts6A | 0.15 | 0.03 | 1.02 | 0.65 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PIEGRLQLKLIVTLVCATGLSLRNPYAKVFLLPDR-SH------KSKRRTKTVGTT---CEPRWG--QTFVYSG-LRRC------DLNGRLLEVTLWDYVRYGANDFIGEVVIDLAHHILDD---EAEWYQLQ------------------------------------------------------------------------------------------------------------------------- |
10 | 6ibdA2 | 0.11 | 0.03 | 0.91 | 0.52 | CEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQFVQGQIEFLRCYATLKTKSQTKFYLEFHSSCLESF----------VKSQEGENEEGSEGELVVKFGETLPKLKPIISDPE---YLLDQHILISIKSSDSD---ESYGEGCIALRLEATETQLPIYTPLTH-----------------------------------------HGELTGHFQGEIKLQTS---------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|