Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHCCCCCCSSSSCCCCCCCHHHHHHHHHCCCCCCSSSCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHCCCCCSSSSCCCCCCCCCCCCCCSSSSCCSSSSSSCCCCCCCHHHHHHHHHHCCCCCCCCCCC YVIDKFAKNLLTSMPHDAIILLRGDLPGNSLRYMHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVNFPGNRWNPVEGILPSGMVTFNLYHFLEVNKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVPLEIVFNPEEWIKLTKSIYNWTEEYGRF |
1 | 1cdoA2 | 0.07 | 0.06 | 2.59 | 0.51 | CEthreader | | VSTGFGAAVNTAKVEPGSTCAVFG--LGAVGLAAVMGCHSAGAKRIIAVDL--NPDKFEKAKVFGATDFVNPNDHSEP-----------ISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGG |
2 | 1fztA | 0.06 | 0.05 | 2.24 | 0.43 | EigenThreader | | ETGIKEAKLGGERLKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSLNERYYGDDARKKWGAEQVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVEKVLIAALTGDQIVKRELATG-----VPIVYHLDKDGKYV-------------SKELIDN |
3 | 3a11A2 | 0.09 | 0.09 | 3.34 | 0.63 | FFAS-3D | | ---ERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGTAKELASYGIPVIYVVDSAARHYMKMTDNKIGTALIALTAKEHRVWTMIAAETYKFHPETMLGFDVTPPEYVDVIITERGIIPPYAAIDILREEFGWALKYTE- |
4 | 5bszA2 | 0.08 | 0.06 | 2.49 | 0.58 | SPARKS-K | | AAEAEWVRRVVRERRPGALLDVTG-------EHLAHLVEHFPDAAGVELS----PAMRAAAERKLTATPVHQADMFDLGRVAADTAELARAVRAMARPVGGVLVIDPWWSPGTF--------------------LTLFPAEDYLAALAAAGCEPEHLTDV |
5 | 6qmmA | 0.12 | 0.11 | 3.76 | 0.73 | CNFpred | | CYHEYLVHPPLTTASIARVLVIGGG-DGGTVREVLRYA--VEQVDLVEID----GRVVELSQEYLGAIGTADPRLNVKI---------GDGIAFVQTAPDASYDVILVDGSFNREFYENRVLKPGGVFASQAESP-DSFLAVHLEMIETLSAVFAEAKPY |
6 | 6uekA | 0.06 | 0.06 | 2.40 | 1.00 | DEthreader | | QGIVHGTTITFRNAGLKVVLTSGLGGMSGAQGKAGV-I-CGAV-VVVA-EV---ETDVEALLRRVRS-VWER-VPVQLTESMFLQESLRQVAAINEMSAGLRFWDYGNFLLEASAEVWTFRYPSYV--QD-------I-GDIFALGFGSQYARHDVSGGF |
7 | 1a2oA | 0.07 | 0.06 | 2.61 | 0.66 | MapAlign | | --APTTLKAGPLLSEKLIAIGASGTEAIRHVLQPL--PLSSPAVIITQHMTRSFAERLNKEAGHAYIA-PGDKHMELARSGANYQIKIRPVDVLFHSVANAVGVILTGMGNDGAAGMYQTIAQNEACMPRAIGVSEVVDLSQVSQQMLAKIS-------- |
8 | 2l82A | 0.10 | 0.09 | 3.28 | 0.66 | MUSTER | | EILKEIVREIKRQ-GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDK--DFRENIREIWERYPQLDV-------VIVTTDDKEWIKDFIEEAKER-GVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKE--ELIEQVRRFVRKVGSLEHHHHH |
9 | 2pffB | 0.14 | 0.12 | 4.27 | 0.79 | HHsearch | | FIGVRCYEAYPNTSLPPSIL----------EDSLENNEGVP--SPMLSISNLTQEDYVNKTNSHLPAGK-QVELVNGAKNLVSGPQSLYGLNTLRKAKPSGLDQS--RIPFSERKLKFSNRFLPV--ASPFHSHLLVPASDLINKDLVKNFNAKDVYDTF |
10 | 3uogA2 | 0.07 | 0.06 | 2.36 | 0.51 | CEthreader | | PCAGLTAWFALVELRAGDRVVVQG---TGGVALFGLQIAKATGAEVIVT--SSSREKLDRAFALGADHGINRLEED-------------WVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIEGFEVSGPVGPLLLKSPVVQGI------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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