Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCSCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPVSLHRPWESSPSIHIVNEVLKDILKRTKRFIFTLIAVLAGLLAVTATAATAGVAIRSSVQTAHYVEACQKNSSRLWNSQAQIDQKLANQINDLRQSVTWLGDRVMNLQHRMQLQCDWNTSDYCITPYAYNQDQHSWENVSRHLKAWDDNLTLDISQLKEQIFEASQAHLSTVPGSHIFEGITKQLPDFNPFKWLKPVRGSLLLLALLILVCLCCLLLVCRCL |
1 | 6x5bB | 0.14 | 0.08 | 2.89 | 2.03 | FFAS-3D | | --------------------------------LGAFILGFLG-AAGSTMGAASMALTVQARLLLSGIVQQQNNLLRAPEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSG--KIICCTNVPWNDSNMTWMQWEKEIDNYTQHIYTLLEVSQIQ----QEKNEQEL-------------------------------------------------- |
2 | 6rw8A | 0.10 | 0.09 | 3.28 | 1.17 | DEthreader | | ---------------------------MY-RFPVILENAKWGVSQLIQFGNTLLSITERQDAEALAEILQTQGSELALQSIKM-QDKVMAEIDADKLALQESRHGAQSRFDSFNTLYEVNGEQYRRWEIQRNNAEAEIKQIDAQLATLAVRRE-AAVLQKNYLETQQAQTQAQLAFLQSNAALYNWLRGRLSHGTYAGLLAGETLMLNLAQMEKSYLEKDERRS |
3 | 6b0nG | 0.15 | 0.11 | 3.62 | 3.42 | HHsearch | | GGTTETRPGGGDMRDNWPTRAKRRVVGGG-SAIGAVFLGFLG----AAGSTMGAASMTLTVQARNLLSQQQSNLLRAPEAQQHLLKQLQARVLAVER---YLRDQ----QLLGIWGCSG--KLICTTNVPWNSSSEIWDN--MTWLQWDKEISNYTQIIYGLLEESQNQQE--KNEQDLLD------------------------------------------- |
4 | 6ek7A | 0.08 | 0.08 | 3.04 | 0.67 | CEthreader | | KQLENITSADHEVASALKDILDDMKGDINRHQTTTENVRKKVSDYRITLTGGELSSGDKVNGLEPQVKTKYDLMEKS--NMRKSIKELDEKIKEKRQRIEQLKKDYDKFVGLSFTGAIGGIIAMAITGGIFGAKAENARKEKNALISEVAELESKVSSQRALQTALEALSLSFSDIGIRMVDAESALNHINNALRLTSFVNKFQQVITPWQSVGDSARQLVDIF |
5 | 5i6jA | 0.03 | 0.03 | 1.69 | 0.90 | EigenThreader | | AQLTEQMKCLDQQCELRVQLLQDLQDFFRKPVNCWNLLLNQVKRESRDHTTLSDIYLNNVSEDSGRLFKKSKEVGQQLQDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQEVKKIEKM---KEKRQAKYTENKLKAIKARNEYLLALEATNASVFKYYIHLIDQCCDLGYHASLNRALRTF-----LSAELNLEQSKHEGLDAIENAVENSDKQRLME |
6 | 7ll1B | 0.13 | 0.08 | 2.79 | 1.90 | FFAS-3D | | --------------------------------IGAVFLGFLG-AAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSG--KLICCTNVPWNSSNMTWLQWDKEISNYTQIIYGLLEESQNQ----QEKNEQDLLALD---------------------------------------------- |
7 | 6w2vA | 0.08 | 0.07 | 2.69 | 0.77 | SPARKS-K | | -------ATDKEEVIEIVKELAELAKQSTDPNLVAEVVRALTEVAKTSTDT--ELIREIIKVLLELASKLPQAVLEALQAVAELARELAEKTPIAKECAEAVSAAAEAVKKAADLLKRHPGS-----------------EAAQAALELAKAAAEAVLIACLLALDAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERAQEHPNAG |
8 | 4f4cA | 0.08 | 0.07 | 2.83 | 0.74 | CNFpred | | -------------FEHDVMNVVWSYAAMGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILQEISWFDTN-TLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQL----LVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVS--NGLRYELERYSTAVEEAK-KAGVLKGLFLGISFGAMQASNFISFALAFYIG |
9 | 6rwbA | 0.08 | 0.07 | 2.79 | 1.17 | DEthreader | | ------------------------SLYRFPLLIERAKSAVSSVIQFGNSLQSVLERQDNEAMTLLFQQQQQKVLQHTKDIQNNNIQVLQANLEATNSLKSAAKQRSKHYKELLDNGISSEQLIKNYREEWTKNQADKDAEQLAHQYTSVQEQLNMAQKQRNLAELEQGHADALYQMQSTR-GKE-YN--AG--SGNDLYQGLL-AGEDLQLNLQKLENVWLEEQ |
10 | 6gy6A | 0.07 | 0.07 | 2.81 | 0.82 | MapAlign | | DGLKPAKMATLFKEIHDHALSWSGVESKVQQQSIDLENAGKQITLTGDEIISVINILESMKKDIKRQQENTQKVKTAVSDFLSTTIKDLQSKIDEKNKEIDQFQKDYNKYVGLAFSGMVGGIISWITGGIFGDKAEKARKQKNKLIDEVKDLQSQVKDKSALQTSVQNLSLSFAGIHTSMVDAEEALNHLDFMWNTMLTQITTSRDKFFKQVIEPWRDVQGSAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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