Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC MAVSTVFSTSSLMLALSRHSLLSPLLSVTSFRRFYRGDSPTDSQKDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYLFEKPR |
1 | 6vaxB | 0.89 | 0.60 | 16.94 | 1.00 | DEthreader | | ------------------------------------------------I-PLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKK-EQR-LRAPDLE-YL--F |
2 | 6vaxB | 1.00 | 0.68 | 19.06 | 2.28 | SPARKS-K | | -------------------------------------------------IPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYLF---- |
3 | 6vaxB | 1.00 | 0.66 | 18.55 | 1.13 | MapAlign | | ---------------------------------------------------LPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYL----- |
4 | 6vaxB | 1.00 | 0.68 | 19.06 | 1.26 | CEthreader | | -------------------------------------------------IPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYLF---- |
5 | 2lm4A | 0.46 | 0.29 | 8.44 | 1.46 | MUSTER | | --------------------------------------------MGHHHHHHSHMIKRTNEPLDKKRARLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELEEYDSLLNE--LDWDIYYWATKNSPLPDKWANKLLKQLQEFSENKEKEI--------------- |
6 | 6vaxB | 1.00 | 0.68 | 19.06 | 4.73 | HHsearch | | -------------------------------------------------IPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYLF---- |
7 | 6vaxB | 1.00 | 0.68 | 19.06 | 1.98 | FFAS-3D | | -------------------------------------------------IPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYLF---- |
8 | 6vaxB | 0.89 | 0.61 | 17.11 | 1.18 | EigenThreader | | -------------------------------------------------IPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNK--EQRLRAPDLEYLF-- |
9 | 6vaxB | 1.00 | 0.68 | 19.06 | 1.24 | CNFpred | | -------------------------------------------------IPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEYLF---- |
10 | 2lm4A | 0.46 | 0.28 | 8.09 | 0.83 | DEthreader | | -----------------------------------------------HHHHHSHMIKRTNEPLDKKRARLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELEEYDSLLNE--LDWDIYYWATKNFPLPDKWNSKLLKQLQEFSENKEK-E--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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