>Q9NVE7 (352 residues) LPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFR QKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGV VRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVD SYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVT HSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLV VIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKYEVPAE |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | LPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKYEVPAE |
Prediction | CCCCCCCCCCCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCSSSSSSCCCCCHHHHCHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCSSSSSCCCCCCCCCHHHCCHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHCCCCCCSSSSSCCCCC |
Confidence | 9988998889998406999979999999999999999999998525777328999999999999999999747755687428999999999999929999279999999999999999999999727881689999999999999864033320232256556899999997518986576999999985388867999963898502221589999999709979999789861334139999999999961218999987408669993899987758466899999999862997999838875322331001478643231125789999969975428999537899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | LPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKYEVPAE |
Prediction | 4320533750301001036366115100400360044015202615654551561054015302610550374444333310320030032006306171004510550153025005402630572546520200000000000000014221421435431303400550274502121053026205736211000000000100000102003202636030000015300000000400340054026125204411654202001212300002063016302510673501000001101212121303151300000101041006407162000001135588 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCSSSSSSCCCCCHHHHCHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCSSSSSCCCCCCCCCHHHCCHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHCCCCCCSSSSSCCCCC LPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKYEVPAE | |||||||||||||||||||
1 | 1xfiA | 0.37 | 0.34 | 10.21 | 1.33 | DEthreader | FPQLPIENNYRACTIPYRFATPNEISWINVFANSIPSFKKRAESDITVP-DAPARAEKFAERYAGILEDLKKDPESHGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDGKRLENLVRGIFAGNIF--------------M--SFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKN-GQLLGVDT--SKLLIANSGNDLPVIDLSRVSQELAYLSS--DADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
2 | 1xfiA | 0.37 | 0.35 | 10.29 | 2.37 | SPARKS-K | FPQLPMPNNYRACTIPYRFATPNEISWINVFANSIPSFKKRAESDIT-VPDAPARAEKFAERYAGILEDLKKDPSHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIDDGKRLENLVRGIFAGNIF----------------MSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKNGQ---LLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSS--DADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
3 | 1xfiA | 0.37 | 0.35 | 10.28 | 1.89 | MapAlign | FPQLPIENNYRACTIPYRKATPNEISWINVFANSIPSFKKRAESDI-TVPDAPARAEKFAERYAGILEDLKKDPESHGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIDDGKRLENLVRGIFAGNIF----------------MSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLGQLLGVDT-----SKLLIANSGNDLPVIDLSRVSQELAYLS--SDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
4 | 1xfiA | 0.37 | 0.35 | 10.29 | 1.80 | CEthreader | FPQLPMPNNYRACTIPYRFPSPNEISWINVFANSIPSFKKRAESDITV-PDAPARAEKFAERYAGILEDLKKDPESHGGPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAEDDGKRLENLVRGIFAGNIF----------------MSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKN---GQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSD--ADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
5 | 1xfiA | 0.37 | 0.35 | 10.29 | 1.98 | MUSTER | FPQLPMPNNYRACTIPYRFATPNEISWINVFANSIPSFKKRAESDITV-PDAPARAEKFAERYAGILEDLKKDPEHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDGKRLENLVRGIFAGNIF-----------------SFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKNGQ---LLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSS--DADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
6 | 1xfiA | 0.37 | 0.34 | 10.13 | 5.33 | HHsearch | FPQLPMPNNYRACTIPYRFATPNEISWINVFANSIPSFKKRAESDITVP-DAPARAEKFAERYAGILEDLKKDPES--HGGPPDGILLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDGKRLENLVRGIFAGNIF-MS---------------FLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILG-IPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKNG---QLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLS--SDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
7 | 1xfiA | 0.37 | 0.34 | 10.21 | 3.04 | FFAS-3D | FPQLPMPIEYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDIT-VPDAPARAEKFAERYAGILEDLKKDPESHGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIDDGKRLENLVRGIFAGNIFMSF----------------LASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKNG---QLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLS--SDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV-- | |||||||||||||
8 | 1xfiA | 0.33 | 0.30 | 9.03 | 1.58 | EigenThreader | QLPMPIENNYRACTIPYRKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILEDLKKDPESHGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFMSFLASC--------QNL----------VPRPWVLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLK-----------NGKLLIANSGNDLPVIDLSRVSQELAYLSS--DADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNV--- | |||||||||||||
9 | 1xfiA | 0.37 | 0.35 | 10.28 | 2.05 | CNFpred | FPQLPMPINYRACTIPYR-ATPNEISWINVFANSIPSFKKRAESDI-TVPDAPARAEKFAERYAGILEDLKKDPESGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIDDGKRLENLVRGIFAGNIF----------------MSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLK---NGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSS--DADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNE--- | |||||||||||||
10 | 3pt1A | 0.13 | 0.12 | 4.05 | 1.17 | DEthreader | -------HTI--PGRFTIDKGTFGEYTATRWPIIIQNAIDDLSKHQEKSFEGEVIKKELKEFRQEIIDRVPLPEVNGAVEWLFSEVYLYRRVNVLFQWFDIFNRLKQSTFESSFYGVVELALRYLQDILKVLFKEFIEISLWGNAT------------------DLSLLAAASESKIVVNDTEKAWEVLTKADEIRVDFVLDNSGFELY-ADL-LAAFLLQSGAKCIFHAKDIPYVSDV-LKDFDILVHLRLDLFAGEEKFVSSGKIEFREDSFWTTELDLEYHGSILHKDLQ--KSNLVIFKGD-LNYRKLTGIGLNITSLSLRTCKA-DVQVALDLWCKWAVICFCSGI- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |