Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCHHHHHHCCCCCCCCCCSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC MGNLLKVLTCTDLEQGPNFFLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRMSLFYAEATPMLKTLSDATTKFVSENKNL |
1 | 6yjjA | 0.88 | 0.78 | 21.85 | 1.17 | DEthreader | | -----------------SGNLKVRNAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELK-TNPAIQNDFSYYRRTLSR-RINN----EN-EVNNELANR-SLFYAEATP-LKTLSDATTKFVSNLPEN |
2 | 6yjjA1 | 0.87 | 0.84 | 23.56 | 2.18 | SPARKS-K | | SGNLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELK-TNPAIQNDFSYYRRTLSR------RINNENEVNNELANR-SLFYAEATP-LKTLSDATTKFVSDNKSL |
3 | 6yjjA | 0.86 | 0.82 | 23.05 | 1.45 | MapAlign | | --NLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELK-TNPAIQNDFSYYRRTLS------RRINNENEVNNELAN-RSLFYAEAT-PLKTLSDATTKFVSDNKSL |
4 | 6yjjA1 | 0.86 | 0.83 | 23.31 | 1.23 | CEthreader | | SGNLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELKT-NPAIQNDFSYYRRTLSR------RINNENEVNNELANR-SLFYAEATPL-KTLSDATTKFVSDNKSL |
5 | 3p8cA1 | 0.18 | 0.16 | 5.31 | 0.96 | MUSTER | | -------VTLEDALSNVDLLEELPL-ARYIEQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKEQPNRVEIYEKTVEVLEPEVTKLMNFMYFQRNAIERFCGEVRRLCHAE---RRKDFVSEAYLITLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRKMADPQ------SIQESQNLSMFLANHNKITQSLQQQLEVIYEE--DI |
6 | 6yjjA1 | 0.89 | 0.85 | 23.94 | 5.47 | HHsearch | | SGNLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELK-TNPAIQNDFSYYRRTLSR-RINNE-----NEVNNELANR-SLFYAEATP-LKTLSDATTKFVSDNKSL |
7 | 6yjjA1 | 0.82 | 0.79 | 22.18 | 2.85 | FFAS-3D | | SGNLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELK-TNPAIQNDFSYYRRTLSRRINNENEVN-------NELANRSLFYAEATPL-KTLSDATTKFVSDNKSL |
8 | 6yjjA1 | 0.71 | 0.68 | 19.42 | 1.38 | EigenThreader | | SGNLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELKT-NPAIQNDFSYYRRTLSR---RINNENEVNNELANRSLFYAEA--TPLKTLSDATTKFVSDN---KSL |
9 | 6yjkA | 0.90 | 0.88 | 24.71 | 1.62 | CNFpred | | MGNLIKVLTRDIDHNASHFFLDFENAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINN-----ENEVNNELANRMSLFYAEATPMLKTLSDATTKFVSDNKSL |
10 | 6yjjA1 | 0.89 | 0.78 | 21.85 | 1.17 | DEthreader | | -----------------SGNLKVRNAQPTEAEREIFNQVNVVLKDAEGILNDLQSYRGAGHEIREAIQHPNDENLQEKAWSAVCPLVGKLKKFYEFSQRLEAALHGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELK-TNPAIQNDFSYYRRTLSR-RINN----EN-EVNNELANR-SLFYAEATP-LKTLSDATTKFVSNKSL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|