Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CSSSSCCCCCCCCCCCSSSSSCSSSSCCCCCSSSCCCSSSSCCCCSSSSSCCCCCCHHHHHHHHHCCCCCCCCSSSSCCCCSSSSSCCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCSHHHCCHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCSSSSSSCCHHHHHHHCCSSSSSSCCSSSSCCCCHHHHHHHHHHHHHHHCCC EVVMKFPDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPLASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSHDERFIRLVCRELWVCEGGGVTRVEGGFDQYRALLQEQFRREGFL |
1 | 7lkpA | 0.24 | 0.23 | 7.03 | 1.33 | DEthreader | | -------PGPQ--KTDILRLHELTKIYPGTSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAKEVNMGYCPQFD--AIDELLTGREHLYLYARAEIEKVANWSIKSLGLTV-YADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIRAVVLTSHSMEECEALCTRLAIMVKGAFRCMG-TIQHLKSFLQVFVNFKQQ- |
2 | 5zxdA2 | 0.43 | 0.42 | 12.23 | 2.38 | SPARKS-K | | TVRFTFPDPPP-LSPPVLGLHGVTFGYQGQKPLFKNLDFGID-DSRICIVGPNGVGKSTLLLLLTGKLTPTHGE-RKNHRLKIGFFNQQYAEQLR-EETPTEYLQRGFN-LPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVV-- |
3 | 4u00A | 0.22 | 0.20 | 6.18 | 0.55 | MapAlign | | ---------------PIIRIRNLHKWF-GPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDIRREVGMVFQQF--NLFPHMTVLENVTLAPEKA-EKKALELLERVGIL-DQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLGMTMVVVTHEMGFAREVADRVVFMDGGQIVEE-GRPEEIFERTRSFLQRV--- |
4 | 7dd0A | 0.20 | 0.19 | 5.97 | 0.34 | CEthreader | | -------------MKLKVSFRNVSKQYHNGFFAVRNVSFDVYEGETIGFVGINGSGKSTMSNLLAKIIPPTSGEIEMN--GQPSLIAIAAG--LNNQLTGRDNVRLKCLMEIDDMYDSIVEFAEI-GDFINQPVKNYSSGMKSRLGFAISVHIDPDILIIDEALSVGDQTFYQKCVDRINEFKKTIFFVSHSIGQIEKMCDRVAWMHYGELRMF-DETKTVVKEYKAFIDWFNKL |
5 | 5zxdA2 | 0.43 | 0.42 | 12.34 | 2.08 | MUSTER | | TVRFTFPDPPP-LSPPVLGLHGVTFGYQGQKPLFKNLDFGID-DSRICIVGPNGVGKSTLLLLLTGKLTPTHGERKN-HRLKIGFFNQQYAEQLR-EETPTEYLQRGF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVV-- |
6 | 1z47A | 0.22 | 0.20 | 6.32 | 0.91 | HHsearch | | -------------GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRNVGLVFQNYA--LFQHMTVYDNVSFGVPDEMDARVRELLRFMRLES-YANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVGVTSVFVTHDQEEALEVADRVLVLHEGNVE-QFGTPEEVYEKPGTLF-VASFI |
7 | 5zxdA2 | 0.44 | 0.42 | 12.33 | 2.65 | FFAS-3D | | TVRFTFPDP-PPLSPPVLGLHGVTFGYQGQKPLFKNLDFGID-DSRICIVGPNGVGKSTLLLLLTGKLTPTHGERK-NHRLKIGFFNQQYAEQLR-EETPTEYLQRGF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEAL------ |
8 | 5zxdA2 | 0.40 | 0.39 | 11.42 | 0.80 | EigenThreader | | YTVRFTFPDPPPLSPPVLGLHGVTFGYQGQKPLFKNLDFGIDD-SRICIVGPNGVGKSTLLLLLTGKLTPTH-GERKNHRLKIGFFNQQYAEQLREETPTEYLQRGFN--LPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEAL----GE |
9 | 5zxdA | 0.43 | 0.42 | 12.24 | 2.21 | CNFpred | | TVRFTFPD-PPPLSPPVLGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFN-LPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEV--- |
10 | 4finA | 0.26 | 0.25 | 7.75 | 1.33 | DEthreader | | EANELFIPPGPRLGDKVLEVSNLRKSYG-DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFR-ISGQEQPDSGTITLGETVKLASVDQFRDS--DNSKTVWEEVSGGLDIKITEPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGN-LLLDEPTNDLDIETLRALENALLEFPGCA-VISHDRWFLDRIATHILDYQDEKVEFFEGNFTEYEEYKKRLGADALEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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