Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHCCCCCHSHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCCHHHHHCC MATSGAASAELVIGWCIFGLLLLAILAFCWIYVRKYQSRRESEVVSTITAIFSLAIALITSALLPVDIFLVSYMKNQNGTFKDWANANVSRQIEDTVLYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKCTQIKTALKYTLGFVVICALLLLVGAFVPLNVPNNKNSTEWEKVKSLFEELGSSHGLAALSFSISSLTLIGMLAAITYTAYGMSALPLNLIKGGALRPLKIVWGIFFILVALLFVISLFLSNLDKALHSAGIDSGFIIFGANLSNPLNMLLPLLQTVFPLDYILITIIIMYFIFTSMAGIRNIGIWFFWIRLYKIRRGRTRPQALLFLCMILLLIVLHTSYMIYSLAPQYVMYGSQNYLIETNITSDNHKGNSTLSVPKRCDADAPEDQCTVTRTYLFLHKFWFFSAAYYFGNWAFLGVFLIGLIVSCCKGKKSVIEGVDEDSDISDDEPSVYSA |
1 | 5doqA | 0.08 | 0.06 | 2.45 | 1.23 | FFAS-3D | | MNGYDPSRILTELTLTVHIIYATIGVGVPLMIAIAQNDMHYILLARRWTRGFVITVAVGVVTGTAIGLQLSLLW----------------PNFMQLAGQVISLPLFMETFAFFFEAIFLGIYLYTWDRFENQKKHLLLLIPVAIGSSASAMFITMVNAFMNTPQGFELKNGE--LVNIDPIVAMFNPAMPTKVAHVLATSYMTSAFVLASIAAWHLW----------KGNRHIYHRKALHLTMKTAFIFSVASALVG-----------------------DLSGKFLAEYQPEKLAAAELYIHYLFDVMVTIGVFLMVVAAVYWLGSIFRWKWTAKNWFFGLLVAGGPLAMIAIEAGWYL---AEVGRQPWILRGYMKTAEGATTSAH---------------------------VDTMLVLFCLLYIVLVIASATVLIRMFR------------------------- |
2 | 5y50A | 0.07 | 0.06 | 2.59 | 1.09 | SPARKS-K | | FLRETKKLSYIAGAMIAVNSSMYVLQVISIMMVGHL-GELFLSSTAIAVSFCSVTGFSVVFGLAALETLCGQANGAK--------QYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIG-----QDAMVAQEAGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCFGLGSLGAAIAIGVSYWLNVTVLGLYMTFSFGIPSASMICLEWWSFEFLVLLSGILEASVLSVCLSTQSSLYQIPESLGARVANELGAGNP----KQARMAVYTAMVITGVESIMVGAIVFGARNVFGYLFS-------------SE--TEVVDYVKSMAPLLSLSVIFDALHAALSGVARGSG----------------------------RQDIGAYVNLAAYYLFGIPTAILLARGLWIGITVGSCVQAVLLGLIVILTNWKKQARKARERVM------- |
3 | 3rkoB | 0.11 | 0.08 | 2.99 | 1.67 | CNFpred | | --------VLDGLSLTMLSVVTGVGFLIHMYASWYMRG---EEGYSRFFAYTNLFIASMVVLVLADNL------------------------------LLMYLGWEGVGLCSYLLIGFY------------YTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNE---LGTLNFREMVELAPAHF-----NNMLMWATLMLLGGAVGKSAQLP-LQTWLADAMA-------GPTPVSALIHAATMVTAGVYLIARTHGLFLM--------------TPEVLHLVGIVGAVTLLLAGFAALVQDIKRVLAYSTMSQIGYMFLALGVQ-------AWDAAIFHLMTHAFFKALLFLASGSVILACHH--EQNIFKMGGL-------RKSIPLVYLCFLVGGAALSALLVTAGFFSKDEILAGAM-LVGAFMTSLYTFRMIFIVFHGKEQI-------------------- |
4 | 3o0rB | 0.07 | 0.06 | 2.59 | 0.36 | CEthreader | | -----FASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFLFPAIPFNVARMVHTNLLIVWLLFGFMGAAYYLVPEESDCELYS--PKLAWILFWVFAAAGVLTILGYLLVPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVLRGRKTAISMVLMTGLIGLALLFLFSFYNPENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTINRRRRDYPNRAVALWAMGTTVMAFLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLR------------------------------GIGEAMDNRSQVLEMWGFWLMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLR |
5 | 6m9tA | 0.05 | 0.04 | 1.84 | 0.60 | EigenThreader | | GSVSV----------AFPITMLLTGFVGNALAMLLVSRSYRRRECIGWLALTDLVGQLLTTPVVIVVYLS--------------------KQRWEHIDRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHTRAVLLGVWLAVLAFALLPVLGVGQPGTTN-------------------WGNLFFASAFAFLGLLALTVTFSCNLATIKALVSR------GSNIFEMLRIDEGNAAKSELDKAIGKDEAEKLFNQDVDATVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG---------------------------------------------------ETGVAGFTNSLRMLQQAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSWGR--------------ITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQKECNFFLIAVRL |
6 | 3mktA | 0.10 | 0.08 | 2.88 | 1.22 | FFAS-3D | | -IDMAAVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHK--IPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGTKGAAIAANVGLMTGLATACITALLTVLFREQIALL------YTENQVVVALAMQLLLF------AAIYQCMDAVQVVAAGSLRGY------------------KDMTAIFHRTFISYWVLGLPTGYILGMTN---------------------------------------------------WLTEQPLGAKGFW--LGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK------- |
7 | 6cc4A | 0.12 | 0.11 | 3.77 | 1.09 | SPARKS-K | | NAYIQKYLKSLAAVSSMTMFSRVLGFARDAIVARIFGA---GMATDAFFVAFKLPNLLRRIFAGAFSQAFVPILAEYKSKQGE----DATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWN----RFSIPAFAPTLLNISMFNPPVLALAWAVTVGGVLQLVYQLPHLKKIKQMGPAILGVSVSQISLIINTIFASGSVSWMYYADRLMEFPSGVLGVALGTILLLSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYG---------KFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSR----------------QDIK------------------TPVKIAIVTLILTQLMNLAFIGPLSIGLAACLNASLLYWQLRKQKTPQPGWMAFLLRLVVAVLVMSG |
8 | 3rkoC | 0.11 | 0.09 | 3.21 | 1.67 | CNFpred | | -------LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMEYLLMLGFFIAFAVKMPVVPLH--------GWLPD--------------AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTS------------VSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR----MMGGLWSKMKWLPALSLFFAVATLGM-PGTGNFVGEFMI-----------------------------------LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI------------------- |
9 | 5uj9A3 | 0.09 | 0.06 | 2.15 | 0.67 | DEthreader | | VVLNKTFGPYFLMSFLFKAVHDLMMFAGPEILKLLINFVND---------L--SA--QT-VLHQYFHICFVSGMIKTAVIGAVMVDAQRFMDLATYI-MIA-VNGTTWVCTPFLALSSNYWLSLWTDIVQEHTQVRLSVYGALGISQGITVFGYSMAVSIGGIFASLDLNVNLVNRFSKELDTVD-S--MIPQVIKMFMGSLFNVIGACII-AVIIPPLGL-------------------I-YFFVQRFYVASSRQLK--RL---ESVSRSPV-------QKAYYPSI----VANRWLAVRLECVGNCIVLFASL-FA---------SRHSLSAGLVGLSVSYSLQVTTYLNWLV-RMS-------------------------------------------------S--EMETNIVAV------------------------------------------------ |
10 | 2yevA | 0.09 | 0.08 | 3.14 | 0.71 | MapAlign | | -----GVDFYLAAILLLGFSSLLGNA-NFVATIYNLRAQGMSLPIYVWSVFAASVLNLFSLAGLTAATLLVL--LERKIGLSWFNPAVGGPVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTFAHHMFTVGETLFQIAFAFFTAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGR-----------MYDERLGRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTYNADIAGWPELNLLSTIGA---YILGLGGLVWIYTMWKSLRKATASPNFDAATLFAFVAVAALPNVWMWVFLALFAYGLILIAGYLYLRLLLNTFLLVSSSTVHFAHHDLRRGRFNPFRFGLLVTII-LGVLFFLVQSWEFYQFYNLWTAAFFTIVGLHGLHVVIGGFGLILAYLQALRGKITLHNHGTLEAASMYW-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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