Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCSSSCSSCSSCCCCHHHCCCCCCCCSCCCCCCCCCCCCCSSCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSSCCCCCCSSCCCCCHHHHCCCCCCCCCSSCCCCCCCCCCCCCCCSCCCCCCCSSCCCCCCCCSSSSSSCCCCCSCCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCCCCCCCCCCSCCCCCSSCCCCCCSCCCCCCHHHHHCCSCCCCCCCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCCCSSCCCCCCCCSCCSSCCCCCCSSCCCCCCCCSSCCSCCCCCSSCCCCSCCCCCCCCCCC MAAGEPRSLLFFQKPVTFEDVAVNFTQEEWDCLDASQRVLYQDVMSETFKNLTSVARIFLHKPELITKLEQEEEQWRETRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQFVHNPKLTNSCSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSELKRHQKIHQNQEPVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHPVKPSRLNVFCCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEGLMDHWRGYKGKDLCQSSHHKCRVILGQWLGFSHDVPTMAGEEWKHGGDQSPPRIHTPRRRGLREKACKGDKTKEAVSILKHK |
1 | 5v3jE | 0.29 | 0.18 | 5.45 | 1.02 | CEthreader | | -----------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDK------------------VYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQ-----------------------SVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECK--ECGKTFGR-------GSELSRHQKIHT------------------------------------ |
2 | 5v3jE | 0.22 | 0.13 | 4.18 | 1.05 | EigenThreader | | ----PHKCKECGKAF---------------------------------------------HTPSQLSHHQKLHVGE------------KPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLL-----------------------------------THAGARRFECKDCDKVYSC---ASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTG-------------------------------ETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKE---CGKARRSELTHHERSHSGEKPYKECGKTFGRGSELSRHQKIHT------------------------------------------------ |
3 | 5v3jE | 0.27 | 0.17 | 5.09 | 2.54 | FFAS-3D | | -------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKE------------------CGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKP-----------------------YKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------- |
4 | 5v3jE | 0.30 | 0.19 | 5.63 | 6.78 | SPARKS-K | | -----------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKD------CDKVYSCASQLALHQMSHTG------------EKPHKCKECGKGFISDSHLLRHQS-----------------------VHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKE--CGKTFG-------RGSELSRHQKIHT------------------------------------ |
5 | 5v3mC | 0.29 | 0.18 | 5.45 | 5.12 | CNFpred | | -----------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCA------------------SQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQS-----------------------VHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECK--ECGKTFGR-------GSELSRHQKIHT------------------------------------ |
6 | 6bcuA | 0.05 | 0.04 | 1.74 | 0.67 | DEthreader | | --DRQTGSFEFLFVHCADHFLNS---------------------VVADVLSKLLGCVLASLDERLAICTGHSNATGELAQVSGLEMRKWVYVEPYRK--LEIIRQIWWERLQGCQRIVDWQ------MRTWLKYASAHKTLVLLLGVD----HPLPTVHPQVTFTMQQQAQHAIATE-----DQQHKQELHKL-A----------------------------LQ-YSA-TE-RSWYKAWAWAVMNF-----------------TLLMYTVPAVQFFSISLSRGNNLQDTLRVLTWVQLIVGRLIHQLLTDIGRYHPLIILKNMCEHS-------NTLVQQAMMVS-EL--------LTSLELQSLCVPSIAPSLQVITSKQRKGHEDLRQDE--M-----------------KNLSIQRYWVCDTLHAIRDLAYLMSGYLGDRHPSNLG-- |
7 | 1vt4I3 | 0.06 | 0.06 | 2.58 | 1.74 | MapAlign | | KIRHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYERLVNAILDFLPLLRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---- |
8 | 5v3jE | 0.31 | 0.18 | 5.56 | 3.38 | MUSTER | | -----------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCD-----------------KVYSCASQL-ALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------- |
9 | 5v3jE | 0.30 | 0.18 | 5.50 | 2.42 | HHsearch | | -----------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDC------D----------------------------------------KVYSCASQLALHQMSHTGEKPHKCKECGKGFISRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECK--ECGKTFGR-------GSELSRHQKIHT------------------------------------ |
10 | 5v3gD | 0.39 | 0.15 | 4.32 | 0.74 | CEthreader | | ------------------------------------------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKP-------------------------------------------------------------------------------------------------YVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT----------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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