Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCC MNAGPSWNKVQHSKNSSGKRQSKSQVPHASSQPRSSLTAVTQPTEEKLKESISPEARRKRNPLGSRCQGASGNKLFLDFQSMKIIKENADEDSASDLSDSERIPIPPSPLTPPDLNLRAEEIDPVYFDLHPGQGHTKPEYYYPNFLPSPFSSWDLRDMALLLNAENKTEAVPRVGGLLGKYIDRLIQLEWLQVQTVQCEKAKGGKARPPTAPGTSGALKSPGRSKLIASALSKPLPHQEGASKSGPSRKKAFHHEEIHPSHYAFETSPRPIDVLGGTRFCSQRQTLEMRTEEKKKKSSKSTKLQRWDLSGSGSSSKVETSGHIRVPKQAAVILDSADSCKASKTQAHAHPRKKGKAESCGHATVSSEKKLKTNGVKQNTYKLK |
1 | 4k3cA | 0.07 | 0.07 | 2.83 | 0.61 | CEthreader | | RTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDENNSYYLGLGYTHDKLRNVEREYTREKYVNSMKFPINPQNSHYDRIQSADFDLSFGWNYNNLNRGYFPTAGSSANQVGTNFSGYIPLNVIATKGGLAYTNSFGGKEVPFYQLYSAGGMGSLRGFAGGSIGPKAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVG |
2 | 4yibA | 0.06 | 0.06 | 2.60 | 0.63 | EigenThreader | | AGDSAAENVRNEWLKSLGARRQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTLVKNTGKLPSGCTKLLEQAAASGLLRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGKEALLSEESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLTDDQIEWYARAALRARRWDELASVISH---------PEKLQKSPTWLYWLARSRAATGNTQEAEKLYKQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVRRAEDGAVKRALVLFQNSQSAGDAKRATRGFDEDKLLTAAQTAFDHGFYDAVNSAERTDRKLNYTLRYISPFVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLQVPAT |
3 | 2xd8A | 0.12 | 0.10 | 3.44 | 0.53 | FFAS-3D | | ------------------------------------------------MANANQVALGRSNLSTGTGYGGATDKLYLKLFSGEMFKGFQHETIARDLKNGKSLQFIYTGRMTSSFHTPGTPILG---NADKAPPVAEKTIVMDDLLISSAFVYDLDETL--AHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLI--FQKEAAGVVEAIGPQVQVTNGDVSVIYQGDV--ILGRMAMGADYLNPAAA-------- |
4 | 5jcss | 0.09 | 0.08 | 3.03 | 1.36 | SPARKS-K | | IDKAPTEKRELTIPSRGETVKAANGFQLISTVRINEDHQ----------------KDSSNKIYNLN---MIGMRIWNV---IELEEPSEED--------LTHILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGA----HTRVVSVRDLIKLCERLDILFKNPDQLIQSSVYDSIFSEAADCLEPIIQAIGESSSRISLFLTQHVPTNLDDSIKIGRAVLLKEKLNIQKKSMNTLFAFTNHSLRLMCIQMTEPVAKMLAKKLTVINVSQQTPKTVAVPIQENFETLFNATFSKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFN |
5 | 5t8vA | 0.04 | 0.01 | 0.42 | 0.41 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------RAARTSMRIMCGGREEKQLYSENAIEQALSLCKLIDGIIMPLAELRNTSDTEELFKALSSCKRRILPLTDAQKLLSMMS------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6ebnA | 0.10 | 0.07 | 2.42 | 0.67 | DEthreader | | ------------------DDHERISALFLA-ALQQWLTTVAQKAARDANAFITTDMQTS------T-VIA-L----LPAILGFLSTFTTLIEEGLQLSEMLWGHIASG-TVA--E-A-VSTLDPDRLHDEYNISPQFLEKM----------PVVLSRNVPVMDINE---GVDRITEILQHIKYADSITIGALC-GIYGIEG-----S--KPGAAASAVFAHL-------------AAHWSAMSFTVACNFRNTDVEANIVLRNFQKIVEVEYRIRNDM----------------------------------------------------KPSIHTSGRRQIKRSLDLE-YP-LMPFYFDHVIVVPIH--------YVDSALN |
7 | 6lyqA | 0.06 | 0.06 | 2.69 | 0.95 | MapAlign | | LFATGNFEDVRVLRDGDTLLVQVKERPRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYGYARFNIDSTQVSLTPDKKGIYVTVNITEGYNGTKVTKMEDDIKKLLGRYGYAYPMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYANGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLG-- |
8 | 2atyA | 0.08 | 0.07 | 2.84 | 0.87 | MUSTER | | GRISYYSTPIAVGTVSGTFRLIGEKSLLCITKDKVDGTPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFA-----CKTNFSMNGNANNMWGPTRLPTCVSVFPLEGSIEGRELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKD-------VLTITLTPKVT------------------------------VVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKERVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVS-MITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKQKSNWEAGNTVLHEGLHNHHTEKSLSHSPGK------- |
9 | 2dkzA | 0.14 | 0.03 | 0.90 | 0.55 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------GSSGSSGPWQPPADLSGLSIEEVSKSLRFIG-----------LSEDISFLVQLTE---EILSEDFKLSKLQ----------V----KKIMQFINGSG----PSSG----------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3vi3A1 | 0.07 | 0.07 | 2.82 | 0.59 | CEthreader | | VSVLVGAPKANTSQPGVLQGGAVYLCPWGASPTQCTPIEFDSKGSRLLESSLSSSEGEEPVEYKSLQWRAHGSSILACAPLYSWRTEKEPLSDPVGTNFTRILEYAPCRSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYYPEYLINLVQGQLQTRQASSIYDDSYLGYVAGVPKGNLTYGYVTILNGSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLLVGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGR----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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