>Q9NTI5 (408 residues) PGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGD LTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFA QKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKL LSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKM VENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDK NFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSN PSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLVRSEL |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | PGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLVRSEL |
Prediction | CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC |
Confidence | 998888887881108999999999999999997247635777776999999999983796367789999999999999999999992374032046999999999998189899999999999999871899989999999996088789999999999999999999999631000112322458999999999951899998679899999999999999999850466408999999999966236788763111537999999999999999862477899888887676057753334576568936888624676544443344577777666777877766667787545677887421234566654577754444467898643457775022212039 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | PGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLVRSEL |
Prediction | 877766641154740363020001000000100212455255303300300130034514026647326211010001002000100324404630416101100100414234004200520251046540311000000000203356125302410340043034225445534742322000000000000000015045473473044014001000100113456301000120032023252234473553141000001000100242065262623551421450043365635553311164045314564545453454355445455555554556465555665565555564446446556464656555646454555456455545336757 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC PGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLVRSEL | |||||||||||||||||||
1 | 5f0oA2 | 0.17 | 0.10 | 3.30 | 0.83 | DEthreader | GDEDDQQAWFSDIGKADALSAKVFSLKLFANKIKVMA-MTHAFTERTLKLFFYLVASGGELVSNYPTPANYQNKLRCCAGLHILKITKIA----FIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTLSK--ENFR--K-----GT--FFERALPRLIHFIAHHPDVAGLLLT-GLTTAIDYLVFYADSVLK-A-S-NLALLYYLAGRV-RQY-------G-GG--GG-GGGGGGGGG--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 3ea5B | 0.09 | 0.08 | 3.17 | 0.77 | EigenThreader | PQSPLQS--------YNFALSSIKDVVPNLLNLLTRQWNVSMSAGACLQLFAQNCGNHILEP------VLEFVEQNIRNREAAVMAFGSIMDRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLA---------EAYNFYPALVDGLIGAAN---------RIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSDAMMNVLAQMISNPNARREMALCVAAQNTKPENGTLEALDYQIKVLEAV | |||||||||||||
3 | 5f0oA | 0.17 | 0.11 | 3.46 | 1.65 | SPARKS-K | GDEDDQQAWFSDEDIADALSAKVFSLKLFANKIKVMAM-THAFTERTLKLFFYLVASGGELVSESNTPANYQNKLRCCAGLHILKITKIA----FIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTL--------SKENFRKGTF---FERALPRLIHFIAHHPDVAEGRLLTGLTTAIDYLVFYADSVLKAS---NLALLYYLAGRVRQYGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 6qj3A | 0.13 | 0.11 | 3.92 | 1.47 | HHsearch | LSNKEFN---SNDTK---------GPKSVSAFI-RLSELSRCALIEVFGNL-AYLSKSEERGENHSQNLDINPYCRCRTIQVYIKLCELDQ----KFPKRRQLACRSL-DKSSHVRRNAIKLLATLIRTHQLARKDWERLELNVLKEEKIEQAATSEAIEKLTL-TKRYYTEA-----LKFIDVLHEATPVICQLLGWTKGSSDGKGVTLIEAELTSLEQLLH--LKQG--IPDLVIAKLWQVYGVQRREISKKQ--RRGAILQLAKYTCIALRRIN-PTS----TFSRLPNAVLVKLAAVPTDNKEWHPDVLCSEIIRRKTRALFIVGHVAIKQIVELCELDFKRRKQEDNE---LD-----IGGT---TEDDFTEAREREL-NLQSSEYCETI-ERSPDPTVRSNA | |||||||||||||
5 | 5f0oA | 0.17 | 0.10 | 3.39 | 0.95 | MapAlign | -DEDDQQAWFSDEDIADALSAKVFSLKLFANKIKVMA-MTHAFTERTLKLFFYLVASGGELVDNYPTPANYQNKLRCCAGLHILKITKI----AFIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTL-----------SKENFRKGTFFERALPRLIHFIAHHPDVAGLRLLTGLTTAIDYLVFYADSV---LKASNLALLYYLAGRVRQYGGGG---GGGGGGGGGGGGGGGGGGG--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5f0oA | 0.17 | 0.11 | 3.46 | 0.74 | CEthreader | GDEDDQQAWFSDEDIADALSAKVFSLKLFANKIKVMA-MTHAFTERTLKLFFYLVASGGELVSNYPTPANYQNKLRCCAGLHILKITKIA----FIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTLSKENFRK-----------GTFFERALPRLIHFIAHHPDVAEGLRLTGLTTAIDYLVFYADSVLKAS---NLALLYYLAGRVRQYGGGGGGGGG--GGGGGGGGGGGGGG---------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5f0oA2 | 0.17 | 0.11 | 3.46 | 1.11 | MUSTER | GDEDDQQAWFSDEDIYDALSAKVFSLKLFANKIKVMA-MTHAFTERTLKLFFYLVASGGELVSESNTPANYQNKLRCCAGLHILKITKIA----FIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTLSKENFRKG-----------TFFERALPRLIHFIAHHPDVAELRLLTGLTTAIDYLVFYADSV---LKASNLALLYYLAGRVRQYGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 5f0oA2 | 0.18 | 0.11 | 3.59 | 6.83 | HHsearch | VGEDDQQAWFSDEDIYDALSAKVFSLKLFANKIKVMAMT-HAFTERTLKLFFYLVASGGELVSESPTPANYQNKLRCCAGLHILKITKIA----FIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTLSKEN-FR----------KGTFFERALPRLIHFIAHHPDVAEGLLLTGLTTAIDYLVFYADSV-LKASNLA--LLYYLAGRVRQYGGGGGGGGGGGGGG----GGGGGGG-----GG--------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5f0oA2 | 0.18 | 0.11 | 3.43 | 2.17 | FFAS-3D | GDEDDQQAWFSDEDIYTALSAKVFSLKLFANKIKVMAMT-HAFTERTLKLFFYLVASGGELVSESNTPANYQNKLRCCAGLHILKITKIA----FIKPQDISKLMNLVEDESLEVRSSFIGRLKDFLGDGSISIKFLPLVFFTAYEPDQALRTSTKMWINYTLSKENFR-----------KGTFFERALPRLIHFIAHHPDVEGLRLLTGLTTAIDYLVFYADSV---LKASNLALLYYLAGRVRQYGGGGGGGGGGGG----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5hdtA | 1.00 | 0.75 | 21.07 | 2.19 | CNFpred | PGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQP------TKNYLPPEM----------------------------------------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |