Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCSSSSSCCHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCSSSSSSSCCCCCSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCSSSCCSSSSCCCSCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCSSCCCCCCCCCCCCCCCCCCCCCCC MYDAERGWSLSFAGCGFLGFYHVGATRCLSEHAPHLLRDARMLFGASAGALHCVGVLSGIPLEQTLQVLSDLVRKARSRNIGIFHPSFNLSKFLRQGLCKCLPANVHQLISGKIGISLTRVSDGENVLVSDFRSKDEVVDALVCSCFIPFYSGLIPPSFRGVRYVDGGVSDNVPFIDAKTTITVSPFYGEYDICPKVKSTNFLHVDITKLSLRLCTGNLYLLSRAFVPPDLKVLGEICLRGYLDAFRFLEEKGICNRPQPGLKSSSEGMDPEVAMPSWANMSLDSSPESAALAVRLEGDELLDHLRLSILPWDESILDTLSPRLATALSEEMKDKGGYMSKICNLLPIRIMSYVMLPCTLPVESAIAIVQRLVTWLPDMPDDVLWLQWVTSQVFTRVLMCLLPASRSQMPVSSQQASPCTPEQDWPCWTPCSPKGCPAETKAEATPRSILRSSLNFFLGNKVPAGAEGLSTFPSFSLEKSL |
1 | 4akfA | 0.12 | 0.10 | 3.37 | 1.39 | MapAlign | | -VSAPEHKGLVLSGGGAKGISYLGMIQALQER--GKIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLTKLLDNSGVGFRARGDRFRNILDVIYMMQMPRLTLGDLGKNLSVVVTNQTKHELERYSEPQQS--IAQVVQWSGAHPVLFV--PGRNAGEYIADGGILDNMEIEGLEEVLCVKAEAGTAFEAISWFKARMDSEATIGGKWLHATSLNREVTTTNTSPTPEQRARAVKNGYDQTMQLLDSHKQTFDHPLMAILYIGHDKL---------KDALIDEKSEKEIFEASAHAQAILH-------------------LQEQIVKEMNDGDYSSVQNYLDQIEDILTDAKMDIQKEKAFALCIKQVNFLSEGKLETYLNKVEAEAKAAAEPSWATKILNLLWAPIEWVV------------------------------------------------------------------ |
2 | 5fquA | 0.18 | 0.08 | 2.64 | 1.40 | FFAS-3D | | ----RPKIGLVLSGGAARGLAHIGVLKALDEQGIQI----DAIAGTSGAVVGGLYASGYT--------PAELERIALEDWQPLGVIQGQNLAVLESLLVHTSDNRDFDKLAIPFRAVSTDIATGEKVVF----RKGHLPQAIRASSIPA-----VFAPVEIRLLVDGGV-DNIPVDGVDVVIVVDIGNPLRDRKDLSTVLDV------NQSITLTRKNSEAQLDVLIQPDFGRVPQLIDAGYRATTVLAAR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 4akfA | 0.13 | 0.10 | 3.60 | 4.00 | HHsearch | | SVSAPEHKGLVLSGGGAKGISYLGMIQALQERGK--IKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLDNILDVIYLQPISRGIV-INNVDDILDKAIPTEENKHLIKNLSVVVTNQTKHELERYS----EDTIAQVVQWSGAHPVL--FVPGRAKGEYIADGGILDNMPEIEGLDEEVLCVKAEAGTFEDMEAISWFKARSLVEATIGGKWLKVYYNIDNMIYITPEQRARAVKNGYDQTMQLLDSHKQTFDH-PLMAILYI--GH----DKLKD-----------ALIDEKSEEIFEA-----------SAH---AQAILHLQEQIVKNDGDYSS---------VQNYLDQ----IEDILTVDAKMDDIQKEKFALCIKQVNFLSEKLETYLNKVEAEAKAAAEPSWATWAPIEWV---VSLFKGPAQDFKV------------------------------------------- |
4 | 6aunA2 | 0.14 | 0.08 | 2.69 | 1.12 | SPARKS-K | | DEKRIHDHLLCLDGGGVKGLVIIQLLIAIEKASVATKDLFDWVAGTSTGGILALAILHSKSMAYMRGVYFRMKDEVGSRPYES--------GPLEEFLKREFGEKMTDVKKPKVMLTGTLSDRAELHLFRNYDADQLVWRAARSSGAAPTY--FRPNG----RFLDGGLLANNPT------------------------------------------------------------LDAMTEIHEYNQDMIRKGQGNKVKKLSSPQVPVTCKELGKMVVDCCTDPDGR------AVDRARAWSEMVGIQYLGSDIMLDDAVLVNALWETEVYIYEHREEFQKLVQMLLSP------------------------------------------------------------------------------------------------------------------------------------ |
5 | 4qmkA | 0.09 | 0.08 | 2.89 | 1.12 | EigenThreader | | GRPPPPAHLVLSGGG-AKGIAFPGMVQALEEADK--LKGVKVVSGSSAGAICAALLASGMDAKAFTQLSNNELGKLVRSLPGPVGNPRQPLEDLIRNESRQSILAHIAGAIKQLNITGFD----GRPQLFNANLTPDMGRAALISGALPGRSFPESPL-------------------GKDEAVKFE-------DRLQAFSEQTVTLPLNSDK------------GDFTMTPEQKQHLQAQARQTVSGHLQQRELERAVMAMDDQMLASVQVDLQNDAAGAEALRFRKDAQQALQALDTAIAEANQTSTSLVITPKLASALRNLDALAIEWLGKRLNAPGTKQGLSKVLTSAVAEMQKRDIGVKAENFIREVYPSLYRPGQPAANVELLQRAVRDLGEAEFNRVLDGIVKHYRARNKPWSKPFSSTTVEQAKAWRIPV-------------------------------------------- |
6 | 1oxwC | 0.13 | 0.07 | 2.30 | 0.67 | DEthreader | | -AQLGEVTVLSIDGGGIRGIIPATILEFLEGQLQALADYFDVIGGTSTGGLLTAISTPFAAAKEIVPFYFEHGPQIF-NPSGQILGPKYDGKYL-QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKLPE-DAKYDISYSTAAAPTYFP-PHYFVYEFNLVDGAVTVADPALLIYKLLLSLGTG--TTSEFDTYTAAAWITAASSYTD-----ALTGTTTEDDASE--ANELLVQVGENLLKTYEEALKRFAK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4akxB | 0.11 | 0.09 | 3.27 | 1.07 | EigenThreader | | SSPQGQGESLVLSGGGAKGAAYPGALALEEKG----LDGIRSSGSSAGGITAALLAS--GSPAAFKTLSDETRKAVLGQIATHPEVARQPTVAAIASRLQSVTFGDLDRLIKTLNITGTAFGRPQLVVFNAHTPDLEVAQAAHISGSFPGVFQKVSLG---------VINVPVPEIDKNFDSILEFEQLEG--------------------------LEELREQTVVVPPDEIKAHLQERLQERVGEHLEKRLQASLDEALLALDDSLTSVAQQNPEITDGAVAFRQKARDAFTELTVAIVSANGLLKLDEARQRLDALADTPERLAWLAAELNHADNVDHQQLLDAAALAEAQRRKVAVIAENIRKEVIFPSLYRPGQPDSNVALLRRAEEQLRHANQALNDIVDNYSARSTTVEAKAWRNKE--------------------------------------------------------- |
8 | 5fquA | 0.20 | 0.09 | 2.94 | 0.79 | MUSTER | | ----RPKIGLVLSGGAARGLAHIGVLKALDEQGIQI----DAIAGTS-GAVVGGLYASGYTPAELERIALEDWQPLGVIQ--------QNLAVLESLLVHTSDNRDFDKLAIPFRAVSTDIATGEKVVFR----KGHLPQAIRASS-IPAV--FAPVEIR--LLVDGG-VDNIPVDVVDVVIVVDIGNPLR---DRKDLSTVLDVQSITLTRKNSEAQLATLGDVLIQPDFGRVPQLIDAGYRATTVLAARLAEL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 4akfA | 0.13 | 0.11 | 3.71 | 1.00 | CEthreader | | SVSAPEHKGLVLSGGGAKGISYLGMIQALQERG--KIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLDNSGVGFRARGDRFRNILDVIYMMQMKKHLESVGDLGRLRNLSVVVTNQTKHELERYSETTPQQSIAQVVQWSGAHPVL-FVPGRNAKGEYIADGGILDNMPEIEGLDREEVLCVKAEAGTAFEDRVGKWLHATSSVLNREKVYYNIDNMIYINTGEVTTTNTSPTPEQRARAVKNGYDQTMQLLDSHKQTFDHPLMAILYIGHDKLKDALIDEKSEKEIFEASAHAQAILHLQEQIVKEMNDGDYSSVQNYLDQIEDILTVDAKMDDIQKEKAFALCIKQVNFLSEGKLETYLNKVEAEAKAAAEPSWATKILNLLWAPIEWVVSLFKGPAQDFKV------------------------------------------------------------------------ |
10 | 4akfA | 0.13 | 0.10 | 3.53 | 1.30 | EigenThreader | | EAGQPEHKGLVLSGGGAKGISYLGMIQALQERGK--IKNLTHVSGASAGAMTASILAVGMDIKDIKKLIELYEDKLSRAGIVINNTKSVKDLEKLDKALNSIPTEENKHLIKNLSVVVTNQTKHELERYSEDTTPQQSAQVVQWSGAHPV---LFVPGRNGEYIADGGILDNMPEIEGLDREKAEAGTAFEDRVNKAKQSAMEA-------ISWFKARMDEATIGINTGEVEQRARAVKNGYDQTMQLLDS------------HKHPLMAILYIGHDKLKDALIDEKSEKEIFEASAHAQAILHLQEQ-----IVKEMNDSVQNYLDQIEDILTVDAK-----MDDIQKEKAFALCIKQVNFLSE--------------GKLETYLNKVEAEAKAAAATKILNLLWAPIEWVVSLFKGPAQDFKV-------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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