Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCSSSSSSSSSSSCCCCCCCCSCCCCCCSSSSSSSCCCCCSSSSSSCCCCSSSSCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MSTAREQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDATRNVYRIISIGGAKAIINSTVTPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLAREKSQDGGELTSPALGLASHQVPPSPLVSANGPGEEKLFRSQSADAPGPTERERLKKMLSEGSVGEVQWEAEFFALQDSNNKLAGALREANAAAAQWRQQLEAQRAEAERLRQRVAELEAQAASEVTPTGEKEGLGQGQSLEQLEALVQTKDQEIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARLAEAAP |
1 | 5xg2A | 0.17 | 0.11 | 3.48 | 1.17 | FFAS-3D | | ----------------------------------------------------------------------------------------------TKGAIVRWGKRKEKLIEEIRAREEERNA---------------------------LVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLS-----SITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKEARELTEKIRAVEKEIAALREELSRVEGKLEGL----- |
2 | 6yvuB | 0.08 | 0.08 | 3.16 | 1.03 | MapAlign | | --QSRLFINELVLENFKKMRQDRLSDLIHKSQSCSVAVHFQYVEKPGLIITRKAFKYYINEGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFT |
3 | 1i2hA | 0.77 | 0.29 | 8.31 | 2.38 | HHsearch | | -EFMGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEKS--KMELTSTPSGDL--QSPLTPE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 6yvuB | 0.07 | 0.07 | 2.85 | 0.52 | CEthreader | | AFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLILQGEVEN--------IAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAE |
5 | 2tmaA | 0.10 | 0.08 | 2.88 | 0.97 | EigenThreader | | ----------------------------------------------------------------------------MDAIKKKMQMLK---LDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT |
6 | 2tmaA | 0.12 | 0.08 | 2.73 | 1.12 | FFAS-3D | | -----------------------------------------------------------------------------------------------EDELVSLQKKLKGTEDELDKYSEALKD---------------------------AQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIA-----EDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISE--- |
7 | 2yfaA | 0.10 | 0.06 | 2.35 | 0.94 | SPARKS-K | | --------------------------------------------------------------------------------------------GSHMGDIGQLNKDLTDLRIARLQYMIA--------------------------------------NGDDTAAANTLAKLDAFSKQATTFKSENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEA--DSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER- |
8 | 5xg2A | 0.18 | 0.09 | 2.90 | 0.88 | CNFpred | | -----------------------------------------------------------------------------------------------KEKLIEEIRAREEERNALVVRL-----------------------------------------------------------------GEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGL------------RERAENLRRLVEEKRAEISELERRLSSITSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIE-------VAKRRINELDTLIERERGELAKLRGRIERLERKRD |
9 | 6jlbA | 0.10 | 0.05 | 1.87 | 0.67 | DEthreader | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------RSETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLE-LSKVREEFKELKRNTKKEGDLIAAQALKLEALSKAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDE-LRRVDAENRLQT-KEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQ-E--------- |
10 | 6yvuA | 0.08 | 0.07 | 3.00 | 0.92 | MapAlign | | ----MKVEELIIDGFKGIASMSTVRASSLQDLIYSVTIVFDNTDSPQISVTRIFGNSLICEDPETAKKITFHPKIRARSITLQGDVYDPEGTLSGLVDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKIIEDLDTYRERSKQLNEKFQE-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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