>Q9NSC2 (1324 residues) MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSDLLL HKKNCTKNQLVLIVNENPASPPETFSPSPPPDNPDEQMNDTVNKTDQVDCSDLSEHNGLD REESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLPQLG DLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCGGASGGKLAVPALMEQLLALQQQQ IHQLQLIEQIRHQILLLASQNADLPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLA QSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEKVASSA GASHVSNPAVSSSSSPAFAISSLLSPASNPLLPQQASANSVFPSPLPNIGTTAEDLNSLS ALAQQRKSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCN ICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTS WLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIPISHSATSPPGSVKSDSGGPES ATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTN PLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDKKATDPNECIICHRVLSCQSA LKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVV LQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFDDLDNFSDENMEDCPEGSIPDT PKSADASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSIEGDVLTN DSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEEKPQRAVPSEFANGL SPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGKTFACQSALDIHY RSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSNLGPNQNSAVIPANS LSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLPALPRRTPKQHYCNTCG KTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVD GPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQYAAALSNGLAMKANEISVIQNGGI PPIPGSLGSGNSSPVSGLTGNLERLQNSEPNAPLAGLEKMASSENGTNFRFTRFVEDSKE IVTS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 1160 1180 1200 1220 1240 1260 1280 1300 1320 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSDLLLHKKNCTKNQLVLIVNENPASPPETFSPSPPPDNPDEQMNDTVNKTDQVDCSDLSEHNGLDREESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLPQLGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCGGASGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLASQNADLPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASHVSNPAVSSSSSPAFAISSLLSPASNPLLPQQASANSVFPSPLPNIGTTAEDLNSLSALAQQRKSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIPISHSATSPPGSVKSDSGGPESATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTNPLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDKKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFDDLDNFSDENMEDCPEGSIPDTPKSADASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSIEGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEEKPQRAVPSEFANGLSPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSNLGPNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQYAAALSNGLAMKANEISVIQNGGIPPIPGSLGSGNSSPVSGLTGNLERLQNSEPNAPLAGLEKMASSENGTNFRFTRFVEDSKEIVTS |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCHHHHHHCCCHHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCSCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCSCCCCCHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCSCCCCCCCCCCCCCSCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCHHHHSCCCCCCCCCCCCCCCCSSCCCCCCCCCSSSCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCSCCCCCCHHHHCCCCCCCCCCCCCCSCCCCCCSCCCCCCHCHSCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHSSCCCCCCCSCCCCCCCCCCSCCCCCCCCSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSCSCCCCHHHCCCCCCCCCCCCCCCCCCSCCCCCCCHHHSCCCCCCCCCCCCCCCCSCCCCCCCHHHHCSCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCSCSSSCSCCCCCCSCCCCCCCSCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSCCCCCCHHHHCCCSCCCCCCCCCCCCCCCCCCCCSCCCCCCSCCCCCCCCSSSCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCC |
Confidence | 9864457873235776555688888877778877667898884051322333453478988875469987342058888887655678888886556754225666555555545567777777665555556677765456666778877766655556777766553445678888877654567777786522343047763335677653346777666554067877643104441003222222123521024688799388667775415689877145412552234245512212115746866888887667756776422235787885547787512457661125521478887811688875234455667676765334235566428768746662577741254404435758764424232468599987305788765256552022232315877833788777325654413443023688787787682068888723565776323423687783257788866541014468778667888752135677642023357878966788887126634332003445788897788898712451345430113368899778878875211135652133412326886481268887621341225601011222678584178786532556551111132568759147868773455553112103146868988876368777734563320001130268888678888651132333331121100101123589888337888874355222454133447888955787466125554532233101134686708888888851155554552122115888810788886113457887732223345784981578887767875323436888810688887232256562122022468868307878663356221212003235875800787886204555201231203688878744557778876134555432345565001552234544734677774524567765255566220202246886831788886404545532331223688880378787632452221233030268888332575013467620238888511533562311212168798207888440067342122144431268878588777762355555531111211367777545673275267777521455453331022479 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 1160 1180 1200 1220 1240 1260 1280 1300 1320 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSDLLLHKKNCTKNQLVLIVNENPASPPETFSPSPPPDNPDEQMNDTVNKTDQVDCSDLSEHNGLDREESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLPQLGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCGGASGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLASQNADLPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASHVSNPAVSSSSSPAFAISSLLSPASNPLLPQQASANSVFPSPLPNIGTTAEDLNSLSALAQQRKSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIPISHSATSPPGSVKSDSGGPESATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTNPLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDKKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFDDLDNFSDENMEDCPEGSIPDTPKSADASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSIEGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEEKPQRAVPSEFANGLSPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSNLGPNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQYAAALSNGLAMKANEISVIQNGGIPPIPGSLGSGNSSPVSGLTGNLERLQNSEPNAPLAGLEKMASSENGTNFRFTRFVEDSKEIVTS |
Prediction |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|
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 1160 1180 1200 1220 1240 1260 1280 1300 1320 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCHHHHHHCCCHHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCSCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCSCCCCCHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCSCCCCCCCCCCCCCSCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCHHHHSCCCCCCCCCCCCCCCCSSCCCCCCCCCSSSCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCSCCCCCCHHHHCCCCCCCCCCCCCCSCCCCCCSCCCCCCHCHSCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHSSCCCCCCCSCCCCCCCCCCSCCCCCCCCSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSCSCCCCHHHCCCCCCCCCCCCCCCCCCSCCCCCCCHHHSCCCCCCCCCCCCCCCCSCCCCCCCHHHHCSCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCSCSSSCSCCCCCCSCCCCCCCSCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSCCCCCCHHHHCCCSCCCCCCCCCCCCCCCCCCCCSCCCCCCSCCCCCCCCSSSCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCC MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSDLLLHKKNCTKNQLVLIVNENPASPPETFSPSPPPDNPDEQMNDTVNKTDQVDCSDLSEHNGLDREESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLPQLGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCGGASGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLASQNADLPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASHVSNPAVSSSSSPAFAISSLLSPASNPLLPQQASANSVFPSPLPNIGTTAEDLNSLSALAQQRKSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIPISHSATSPPGSVKSDSGGPESATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTNPLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDKKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFDDLDNFSDENMEDCPEGSIPDTPKSADASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSIEGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEEKPQRAVPSEFANGLSPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSNLGPNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQYAAALSNGLAMKANEISVIQNGGIPPIPGSLGSGNSSPVSGLTGNLERLQNSEPNAPLAGLEKMASSENGTNFRFTRFVEDSKEIVTS | |||||||||||||||||||
1 | 5v3jE | 0.28 | 0.06 | 1.78 | 0.80 | CEthreader | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKC----FECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECG-------------------------------------------------------------------------------------------------------------------------------------------KAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQ------------MSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSG---------DKPYKCKECGKSFTCTTELFRHQKV----------------------------------------HTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 2pffB | 0.08 | 0.07 | 2.67 | 1.40 | EigenThreader | PLTLSHGSLEHVLLVPTASFFIASQLQEQFNKIEGFAADDEPTTPAELVGKFLGYV--------------------SSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAKLLQENDT------TLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDY--------------------------FEELRDLYQTYHVLVGDLIKFSAETLSELPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAEVSVRKAITVLFFIGVRCYEAYPNTSLPDSLENNEGVPSPMLSISNLTQE-----------QVQDYVNKTNSHLPAGKQVEISLVNGAKNLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVA--------------SPFHSH-----LLVPASDLIN------KDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSCIIRLPVKWETTTQTHILDFGPGGASGLTHRNKDGTGVRVAGTLDINPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------GGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
3 | 7aavA | 0.18 | 0.16 | 5.11 | 1.20 | FFAS-3D | ------AIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPI------RTEYKIAFPYLYNNLPHHVHL-----TWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRH---SVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRP------------PKAQKKRYLFRSFVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLPVKTLTTKERKKSRFGNAFHLCREVLRQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLITGPVGKGPGCGFWAAGWITPLLERWLGNLLARQFEGRVESHFD---LELRAAVMHDILDMMPEGIKQNKAIPWKVPGLPTPIENMDWWTNTAHYNRERIRR-----GATVDKTVCKKNLGRLTRLYLKAEQERQVHWLESRRFSPIPFPPLSYKHDTK-LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEA----LSRIKRHLLTQRAFK----EVGIEFMDLYSHLVPVYDVEPLEKITADKRRLFPPWIKPADTEPPPQGINNLQDVWETSEGEC----------NVMLESRFEKMYEKI-------------DLTLLNRLLRLIADYMTAKNNVVGIIRGLQASFIVQYYGLVSEMAGPPQMPNDFLSFQDITEAAHPIRLFCRYID-----RIHIFFR-FTADEDLIQRYLTEHPDPNNEVGYNNKKCWPRMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGEVTKERTAQCFLRVDDESMQRFHNRVRQILTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENK--------IQTRIKIGLN--------------SKMPSRFPPVVF-----YTPKELGGLGMLSGH-----------VLIPQSDLRWSKQTDVGIT------------HFRSHEEDQ-----LIPNLYRYIQPWESEFIDSQRAEYALKRQEAIA-----QNRRL----TLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWYQVLKQNPFWW------THQRHDGKLWNLNNYRTDMIQILEHTPTWEGLF-WQIPNRRFT------------LWNRANVYVGFQVQLDLTGIFMHG---KIPTLKISLIQIFRAH-----LWQKIHESIVMDLCLDALEIETVQKETIHPRKSY--KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQIDIQLRWGDYDSHDI--- | |||||||||||||
4 | 5ijoJ | 0.10 | 0.09 | 3.16 | 1.27 | SPARKS-K | AAAAGGPCVRSSRELWTILL----------GRSALRELS--------------QIEAELNKHWRRLLE---------------GLSYYKPPSPSAEKVKANKDVASPLLGLRISKFLGLDEEQSVQLLQC--------YLQEDYRGTRDSVKTVLQDER---QSQALILKICVLHLLTYFQDERHPYRVEYADCV--DKLELVSKYRQQFEELYKTEATHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYTKMFKEQGF-----GSRQTNRLVDETMDPFVDRIGYFSALILVEGMIESLHKCALD--DRRELHQFAQDGLQDMDCLMLTFGDIPHHAPVLLAALLSSVVRKIGGTAIQLNV-------FQYLTRLLQSLASGGNDCTTSTACMCVYGLLSFVLTLGNQ-QDIIDTACEVLADPSLPELFW-----GTEPTSGLGIILDSVCGMFPHLPLLQLLRALVSGKST-----AKKVYSFLDKMSFYNELYKHK------------------------PHDVISHEDGTLWRRQTPKLLYPL-GGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSVVSTADVIQHCQRVKPIIDLVHKVISTDLSILPITSTTVISPPVDVIASCVNPATDLRHTGFLPFVAHMNAGGYGNLLMNRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHKWRYNSHREQIGCLILELIHAILNLCHETDLHSSHTPSLQFCSLAYTEAGQTVINIMGIGVD-TIDMVMAAGQGQGQLIKTVKLAFSVTNNRLKPPSNVVSPLEQALSQHGA--GNNLIAVLAKY-----------IYPALPRLAIQLLKRLATVAPMLGNDAAAIRDAFLTRLQSRIKVMILEFLTVAVET----------QPGLIELFLNLSVNCLR----LGSMKCTLLLILLRQWKRELGSVQQLMEKTKAKVFSMKEMKVSDIPQYSQLVLNVCETLQEEVIA-------LFHRDQR---------DGVCVLGLHLAKELCEV-------------DEDGDSWLQVTRRLPILPTLLTTLEVSLRMKQNLHFTEATLHLLLTLARTQ--QGATAVAGAGITQSICLPLL-----SVYQLSTNGTAQTPSASRKSL----DAPSWPGVYRLSMS----------------------------LMEQLLKTLRYNFLPEALDFVGVH-----QERTLQCLNAVRTVEEADHTVGFILQLSNFMKEWHLMRDIQVNLGYSRLQHYLQNKNGDGLPSAVAQRV--QRTEASEQQALHTVQYGLLKILSKTLAA----------- | |||||||||||||
5 | 2fgyA | 0.11 | 0.02 | 0.90 | 0.37 | CNFpred | --------------------------------------------IEDDLAQWEKNELRRYREGVP-TRYLKIAVYH--------FSTSDPT---------------HSGCAAHGS----NDRAALEAALTQLMKFRE---------------------------------AVENAHCCGASIDILLIGVDTDTDAIRVHIPDSKGFLNPY-----------RYVDNTVTYAQTLHLA-----PDEARVIIHEAILNANRSDGWAKGNGVASE-------GMRRFIGQLLINNLSQIDYVVNRHGG--------------RYPP-----NDIGH------AERYISVGDG-------------------------FDEVQIRNLA-----------------YYAHLDTVEENAIDVDVGITIFTKLNLPIPIAIHYRYDP-NVPGSRERTVVKARRIY---NAIKERFSSLDEQNLLQFRLSVQAQDIGSPIEEVASA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6bcuA | 0.07 | 0.03 | 1.21 | 0.50 | DEthreader | ---------------------------------------------------------------------------------------------------------------------------------------------------------M-G----A-YVEF----------VLRELAISVPTFFFQQVFNIAKQAIREGALNLIQMTILLPTQYLQDTMALLSVAVRM-RA----YDLSRQIPQLKKIQDGLLMLSVLSITEMEAATCSRLLTPSVS-TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKA---RLSLELLKDSS--S--PSLRSCWAL-----------------------------------------ELIRSIELALTSQDIAEVTQCDTHDGAFYRAVLALHQDLFSAQ-------------------LEEVIQYKLVPERREIIRQIW-WERLQGCQR---------------------------------------------------------SPHED------MRTWLKYASLCGKRLALAHKTLVLLLGVDP-S-RQLDHPLPTVPVTYYMNMHMFLMARFLLGVQYYSAAWVMNFEAVLHYKHQNQRDKKVTEDLSK---V-LTLWFDYG------------Q-------------PLTVASKSTSEELIRVAILWHEMWHEGLEEASRLYFGERNV-------------EWCRKYMKSG-------YY-VFRRISKQLPQLTS--------------------------------------ITSKQRPKLKEDLRQDERVMQLFGLVNTL-A------QRYAVIPLSTNSGLIGW---------------A-------------HLTLMQKVEVFEHAVNNTAGDDLAKLLW-------------RRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLSGKIL----MLTNAMEV--LDGNY-------------------------------------------------------IT-CHTVMEVLREHKDSVMAVLEAFVYDPLNAI-I--RD---------- | |||||||||||||
7 | 2pffB | 0.06 | 0.05 | 2.16 | 2.50 | MapAlign | ------------------LQEQFNKILPEPTEGFAADDEPTTPAELVGKKTKELIKNYITARLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAH-YVVTAKLLGFTPGEL-------------------------------------------------------------------RSYLKGATGHSQGLVTAVAIAET--DSWESFFVSVRKAITVLFFIGVRCLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGG--GGGGGGGGGGGGGGGGGGG--------------------------------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------------------------------------GGGGGGGGGGGGGVWNRADNHFKDTYGFSILDMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKADVMSIESLVEVVFYRGM-----TMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVG------KRTGWLVEIVNYNVENQQYVAAGDL--- | |||||||||||||
8 | 6djyB | 0.12 | 0.10 | 3.42 | 1.09 | MUSTER | SDTTGNPRITNARTNNDETHATGPIEDLNSTSHGREPEIES----------FADRAELAMMIQGMT---------VGALTVQPMRSIRSTFANLANDVFTTEDKPSAF--SDEMIVNMPKQTYNPI--DNLAKILYLPSLEKFKYGTGIVQLNYSPHISKLYQNTNNIINTITDGITYANRTEFFIRVMVMMMDRKILTMEFYDVDTSAISNTAILPTIPTTTGVSPLLR-------------IDTRTEPIWYNDAIKTLITNLTIQYGKIKTVLDANAVKRYSVVGYPIDQYRAYLEYLGKKVKREDIMSLIKALSEFDLITISDLEQNIPKWFSDNDLSRFIFSICMFPDIVRQFHALNID-------------YFSQANVFTVKSENAIVKMLNSNQNMEPTIINRICAIDKTVIDDYFSLEMTPMRPKLYDFDMKRGEPVSLLYILELILFSIMF--NVTQHMLGQ-IQARILYI------------SMYA-----------------FRQEYLKFITKFGFYYKIV-----------NGRKEYIQVTNQNER-----------MTENNDVLTGNLYPSLFTDDPTLSAIAPTLAKIARLMK------------PTTSLTPDDRAIAAKFPRFKDSANPYSSLNIGGRTQHSVTYTRMYDAIEEMFNL--------ILRAFASSFA------QRPRAGVTQLKSLLTQLADPLCLALDGH------------------------VYHLYNVMANMMQNFIPNTDGQFHSFRACSYAVKDG-----GNIYRVVQNGDELNESLLIDTGNTDSSYGNAIGATGTANVPTKVQPVIPT-PDNFITPTIHL--------KTSIDAICSVEGILLLILSR----------------QTTIPGYEDELNKLRTGISQPKVTERQYRRARESIKNMLGSGDYNVAPLHFLLHTEHRSTKLSKPLIRRVLDNVQPYVANLDPAEFENTPQLIENSNMTRLQIALKMLT--GDMDDIVKGLILHKRACAKFDVY------ETLTIPTDVKTI-------VLTMQHISTQTQ--NNMVYYVFLIDGVKILAEDIKNVNFQIDITGIWPEYVITLLLRAINNGFNTYVSMPNIITADVRQFMNTTKAETLLISNKSIVHE-------MFFDNALQPKMSSDTLALSEAVYRIWNSSIITQR--ISARGLMNLEDARPPEA-------------KISHQSELD--------MGKIDETSGEPIYTSGLQ-------KMQSSKVS--MANV----------------LSAGSDVIRQAAIKYNVVRTQEIILF | |||||||||||||
9 | 5v3jE | 0.35 | 0.07 | 2.21 | 2.10 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGAR----RFECKDCDKVYSCASQLALHQMSHTGEK------------------------PH---------KCKECGKG---------------FI---------SDSHLLRHQS-------------------------VHTG---------------------------------------------E----------------------------------------------------TPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTG-----------------------------------------------------------------------------DRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5v3gD | 0.32 | 0.04 | 1.25 | 0.39 | CEthreader | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTG---------EKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTH------------TGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |