Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSSSSSCCCCCCCCCCCCSSSSSCCCCHHHHHHHHHHHHHHCCCCCSSSSSSHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCHHHHHHHHHHHHHHCCCCCCCSSCCCCCCHHHHHHHHCCCCSSSSSSSSSCCCCCCCCHHHHHCCCCCSSSSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCCCCCCCCCCCCCCCCC MGLLAFLKTQFVLHLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRFTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGNKNPSLLGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFKPARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQEFKKKE |
1 | 1k30A | 0.10 | 0.07 | 2.65 | 0.83 | DEthreader | | -----NAVIESADIVLSNMTVALDRILLDVEDPF-V--F---S--HHK-AIREPFDYYIFGQNYIRPLIDFGSFVGNLSLFKDIEELHNVVLISNHQTEADPAIISLLLEKNYIAENTIFVAGDRVLADPLCKPFSIRNLICVYSKKMFTKRKANTRSLKEMALLGGSQLIWIAPSGRDRPDPSTG-------------EWYPAPFDASSVDNMRRLIQSVPGHLFPLALLC---HDIMPRVIA-F--NGAGLSVAPEISFEEIAPEEVREAYSKALFDSVAMQYNVKTGQGASTVSLSQPW-------------------------------------------------------------------------- |
2 | 5kn7B | 0.07 | 0.06 | 2.31 | 1.07 | CEthreader | | IQFGRFLARLLAGLVNTLKITRTSKSIELNLRIAPYLTPQQRIAITEKAVRNELTSYFEFLSIWGNSKNISRIHRIEGEHFFHEALKKGVVLIVPHFG--TWEVMNAWCAQFTSMTILYKPVKNADADRFVREARSREQANLV-----PTDESGVRQIFKALKQ---GETTVILPDHTPNVGGDM------------VNYFGVPLASSNLSAKLIQKTK---AKALFLYAIRNEND-------------GFTMHIEPMDEKIYEGTADDGTYVIHQAIEQLIYQYPEHYHWSYKRFKANPALDNIYNIDPTEALKIVDRLKAEALKTSTQPEPIQTSVM------------------------------------- |
3 | 5kymA | 0.17 | 0.10 | 3.43 | 1.00 | SPARKS-K | | ----MRKIRNLLLTLYFYFIATVYIVFYGGFVLFRSFLM-RDREKARKYVLKEIEKFGKRAFTWL----FSDVVVEGSENIPK---DRNFIVVANHQSLMDIPLILGFV------ATGAFIAKEELRKIPGVNWYIRYLNGVFL--RAVRALREAIEKLKNGV------TFIVFPEGTR-----------------SPDGK-VLSFKKDSLMIAVKT---GVP-VLPVSIWG-------TYHLITFTPGKVFLKIEPVDPKGF-SSEEELRKYVEEVVKRGVEELKARWSK------------------------------------------------------------------------------------- |
4 | 5kn7B | 0.09 | 0.07 | 2.56 | 1.24 | MapAlign | | --QPIQFGRFLARLLAGLVNTLKITRTSKSIELNLRIALYLTPQQRIAITEKAVNELTSYFEFLISSNSKNRIHRIEGEHFFHEALKKGVVLIVPHFG-TW-EVMNAWCAQF-----TSMTILYKPVKDRFVREARSREQANLVPT-DESGVRQIFKAL------KQGETTVILPDHT---------PGGDMVNYFGVPL----ASSN-LSAKLIQK---TKAKALFLYAIRN-------------ENDGFTMHIEPM-DEKIEGTADDGTYVIHQAIEQLIYQYPEH--------------------YH---WSYKRFKANPAL-DNIYNIDPTEALKIVDRLKAEALKTSTQPEPIQ----------------- |
5 | 1k30A | 0.10 | 0.08 | 2.84 | 1.55 | MapAlign | | --EEELLSCIKKETEKLPNVAAGMEELYQNYRNAVIESNPKADEIVLSNMTVALDRIYIFGQNYIRP-LIDNSFVGN-LSLFKDIEGHNVVLISNHQTEADPAIISLLLEKTNIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSLTETKRKANTRSLKEMALLLGSQLIWIAPSGGR--------DR--PDPSTGEWY--PAPFDASSVDNMRRLIQHSPGHLFPLALLCHDIMPPVEIEIRVIAFNGAGLSVAEISFEEIAEVREAYSKALFDSVAMQYNVLKTAIQGLGASVSLSQPW-------------------------------------------------------------------------- |
6 | 5kymA | 0.15 | 0.10 | 3.23 | 1.38 | CEthreader | | ----MRKIRNLLLTLYFYFIATVYIVFYGGFVLFRSFLMRD-----REKARKYVLKEIEKFGKRAFTWLFSDVVVEGSENIPK---DRNFIVVANHQSLMDIPLILGFV------ATGAFIAKEELRKIPGVNWYIRYLNGVFLR-----AVRALREAIEKLKNGVT---FIVFPEGTRS-------------------PDGKVLSFKKDS---LMIAVKTGVPVLPVSIWGTYH--LIPKGRWTFTPGKVFLKIHEPVDPKGFSSEEELRKYVEEVVKRGVEELKARWSK------------------------------------------------------------------------------------- |
7 | 5kymA | 0.16 | 0.10 | 3.44 | 0.85 | MUSTER | | ----MRKIRNLLLTLYFYFIATVYIVFYGGFVLFRSFLMRD-----REKARKYVLKEIEKFGKRAFTWLFSDVVVEGSENIPK---DRNFIVVANHQSLMDIPLILGFVAT------GAFIAKEELRKIPGVNWYIRYLNGVFL-----RAVRALREAIEKLKN---GVTFIVFPEGTRSPD------------------GKVLSFKKDSLMIAVKT---GVP-VLPVSIWGTYHLIPK--GRWTFTPGKVFLKIEPVDPKGF-SSEEELRKYVEEVVKRGVEELKARWSK------------------------------------------------------------------------------------- |
8 | 5kymA | 0.15 | 0.10 | 3.29 | 3.56 | HHsearch | | MRKIR----NLLLTLYFYFIATVYIVFYGGF--VLFRSFLMRREKARKYVLKEIEKFGKRA----FTWLFSDVVVEGSENIP---KDRNFIVVANHQSLMDIPLILGFVA-----T-GAFIAKEELRKIPGVNWYIRYLNGVFL-----RAVRALREAIEKLKN-GVT--FIVFPEGTRSPD------------------GKVLSFKKDSLMIAVKT---GVP-VLPVSIWGTYHLIPKG-R-WTFTPGKVFLKIEPVDPKGFS-SEEELRKYVEEVVKRGVEELKARWSK------------------------------------------------------------------------------------- |
9 | 5kymA | 0.15 | 0.10 | 3.21 | 1.23 | FFAS-3D | | ---MRKIRN-LLLTLYFYFIATVYIVFYGGFVLFRSFLMRDREKARKYV-----LKEIEKFGKRAFTWLFSDVVVEGSE---NIPKDRNFIVVANHQSLMDIPLILGF------VATGAFIAKEELRKIPGVNWYIRYLNGVFLRAV--RALREAIEKLKN------GVTFIVFPEGTRSPDGK------------------VLSFKKDSLMIAVKT----GVPVLPVSIW-------GTYHLIPKTPGKVFLKIHEVDPKGF-SSEEELRKYVEEVVKRGVEELKARWSK------------------------------------------------------------------------------------- |
10 | 5kymA | 0.10 | 0.06 | 2.28 | 1.07 | EigenThreader | | -----MRKIRNLLLTLYFYFIATVYIVFYGGFVLFRSFLMRDREKARKYVLK----EIEKFGKRAFTWLFSDVVVEGSE-------NRNFIVVANHQSLMDIPLILGFV-----ATGAFIAKEELRKIPGVNWYIRYLNGVFLRAVR-------ALREAIEKLKNGVTFIVF--PEGTRSPD------------------GKVLSFKKDSLMIAVK---TGVPVLPVSIWGHLIPKGRWT-----FTPGKVFLKIHEPVDPKGFSSEEELRKYVEEVVKRGVEELKAR---------WSK---------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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