Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600
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| SS Seq | CCCCCCCCCCCSSSSSSSCCCCCSSSSSCCCCCHHHHHHHHHHHHCCCHHHSSSSSSCCSCCCCCSHHHHCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC MAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAGSTPEAPTSSPATPATSSPTGASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANLQALIATGGDINAAIERLLGSQLS |
1 | 3jacA | 0.08 | 0.07 | 2.91 | 1.07 | EigenThreader | | --GGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFHDILHTKATDVYALMFLADIVDIIIIIFGFWAFGKHSAATDIASSLSDDQVPQAFLFMLLVLGKLAFQVVLVVAIHIWMFFILPAVTERMFSQNAVAQLWYFVKCIYFALSAYQIRCGYPTRILGNFLTNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLSNWMCVEDIYANIFIIKCSRETEKKYSRAQMKQELYNGARRQLAQLLEGRPDQSNGPEANPVKQLQREQVGSDFLEWKVSPPSLGFLAGYGIVGLYVSIVLVVGKFVRGFFSEISHSIMFEEL-----PCVDRILKLCQDIF---LVRETRELELEEEL |
2 | 1oqyA | 0.18 | 0.11 | 3.47 | 1.42 | FFAS-3D | | ----------SAVTITLKTLQQQTKIRMEPDETVKVLKEKIEAEKAFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVT-----------------------GSEYETMLTEIMSM------------------------------------GYERERVVAALRASNNPHRAVEYL-----------------------------------------------LTGIPGSPEPEHGSVQESQVSEQPATEAAGENP------------------------------------------------------LEFLRDQPQFQNMRQVIQQNPALLPALLQQ-------------------------------LGQENPQLLQQISRHQEQFIQMLNEPPG------------ELADISDVEGEVGAIGEEAPQMNYIQVTPQ-------------------------------EKEAIERLKALGF-PESLVIQAYFACEKNENLAANFLLSQNFD |
3 | 2qnaA | 0.12 | 0.06 | 2.25 | 1.12 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------AVMAFGCILEGP----------------EPSQLKPLVIMPTLIELMKDPVVVRDTAA--WTVGRICELLPEAAINDYLAPLLQCLIEGLAEPRVASNVCWAFSSLAEAAYEA-PATYCLSSSFELIVQKLLETTDRPDGHQLRSSAYES---------------------------------------------------LMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQM-----LCATLQNVLRKVQDALQISDVVMASLLRMFGSGGVQEDALMAVSTLVEVL-KPFLGIGLKCLAAVGLVGDLCRALQNIIPFCDEVMQLLLENL---------------GNENVHRSVKPQ--------LSVFGDIALAIGGE-----------FKKYLEVVLNTLQQAS--MVDYLNELRESCLEAYTGIVQGLKGDQEN |
4 | 5nz7A | 0.06 | 0.06 | 2.64 | 1.05 | MapAlign | | --APGPHFYVNLLIGNRLGFKRTTTPKSVVDRFGRGSFATREENGFPANRQFYLYEDGKQIFSACIKYKTTIFLVPHLSITYTGMKQDTRFVTMIVRNGDEKSFPQSFCTDYNDFVGTGTLEHPAGGCNLNNKLNRKGPGFFALGAPFTVEPGKTVIIDTFTGLSSSKDNENYSDAVMLRELDNLLRYFEKSESVEETLNEIINFHEFTGNKLFDSGFNNLFQVLYQTSRGYREIGFREIQDLFASMYYFINIYQDFVKELLFEYKMGYANHNFYWVGKQPGLYSDSLWLLQAYYRYIIYTKDTSVLNEEVRAVRETLKAIIQYSACISVGDHGLPLLDLADWNDCLKYYEQLKKTNGKYGDRFMSDYSESVMNAFLLKLAIDHLAEIATLDDTQLAQQMS--ELSKEVTDRIQKHAWKENFFARVLINRYKDGSYTYLGAKGDKLSIDGVYFLNSFAWSVLSDVATDEQIAIMVDVIKKH--------LLTPYGLRLVTPADLNKIANDTATGHYFFGDRENGAVFKHASMMAVAALIKAAKKVKDNELAKEMARIAYFMIPYKNLENPFQVAGNPRICTQYINTDTGENIGPLLSGTAT |
5 | 1oqyA | 0.24 | 0.14 | 4.31 | 1.54 | HHsearch | | ----------SAVTITLKLQQQTFKIRMEPDETVKVLKEKIEAEKGFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPES--STSFPPAPTHPPPAARE--DKSPSEE-------SAPT-TSPESVSGSVPSGSSGREE-DAASTLVT-GSEY--------------ETMLTEI-----------------------------MS-------MGYERERVVAALRASYN---------NPHRAVEYLLGIPGSPEP----------------------EH----GS-----V-QES------------QV--S---E-QPA---------TEA--A-----------------GE------------NP--LEFLRDQPQFQNMRQVIQQNPALLPALLQ-------------QLGQENPQLLQQIS------------------RHQEQFIQMLNEPPGEL-----ADISDV----EGE------VG--A----IG--EE------------------APQMNYIQVTPQEK--EAIERLKALGF-PESLVIQAYFACEKNENLAANFLLSQNFD |
6 | 6tgbB | 0.10 | 0.09 | 3.17 | 1.10 | FFAS-3D | | ---------ADIVKVAIEWPGAYPKLEIDQKKPLSAIIKEVCDGWSLAHEYFALQHASNFYITEKNRNE--IKNGTILRLTT----------------------------------------------------------------------------SPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLSLLTQMVESGDMLSFTLTA---FVELMDHGKKIASFVNDISILQRSLAILNSHDLYQKVAQEIGQLIPHLQGSDQEIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLTKMDPQDQAQRDIIFELRRIAFDRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLERSSIELTKMLCEIKEQVMRALTTKPSSLDQFKSKLKIRQSERMNQEDFQSRPILKEKIQPEILELIKQ--QRLNRLVEGTCFRKLNARRRQDKGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHNKEVLELAFSILYDSNCAPDKHEYCIWTDGLNALKDMMSDLTRNDLDTLL----SMEIKL-RLLDLEPD |
7 | 4fgvA | 0.09 | 0.06 | 2.22 | 1.12 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------IRECLVYLTHLDVVDMEQIMTEKLARQVDGSE--SWHNCNVLC--WAIGSISMNEETEKRFLVTIKDLLGLTEMKNKAVVASNIMYIVGQYPRFLKHWKFLKTVVNKLFEFMHES--HEGVQDMACDTFIKIAKQCRRHFVALQENEPFIEEIIRNIGKITCDLTPQQVHTFYEACGYMVSAQGNRNQQER------------------LLAELM----AIPNAAWDEIIKAATMNPGILH---EPDTIKIIGNIMKTNVSACSSIGPYFFPQ--IGRLYNDMLQMYAATSQLIS-MPKVRGLRKKEILKLVETFVEKAEDLQAVRSQMIPGLLDSVLVDYN---------------RNVPGARDAE-----LKAMTVIITRLQGLMEDQVPA---IMENVFECTLDMINKDFAEYPEHRVEFFNLLRAINLYCFPALLKLDNR |
8 | 2cqtA | 0.09 | 0.09 | 3.30 | 1.00 | MapAlign | | EYVITTPHTPYPWINYLGSEQFFSLLSHQGGYSFYRRLTRYRIPADAGGRYLYVNDGGDVWTPSWLPVKAEARHGLGATLFSFVETDRDTFVGAYNSLGEASVPRAGKSADSVASGWYPIGSHSVAVTLQPGESRDLVYVLGYLENPDEEKWADDAHQVVNKAPAHALLGRFATSEQVDAALEALNSYWTNLLSTYSVSSTDEKLDRMVNIWNQYQCMVTF---NMSRSASFFETGIGRGMGFRDSNQDLFVLIPERARERIIDIASTYHQYQPLTKRGNNDIGSGFNDDPLWLIAGVAAYIGILDEPVPFDNEPGSEVPLFEHLTRSFQFTVQNRGPHGLPLIGRADWNDCLNLNCFSTTPGESFQTTENQAGGVAESVFIAAQFVLYGAEYATLAERRGLADVATEARKYVDEVRAAVLEGWDGQWFLRAPVGTDAGKIWIEPQGFAVMAGIGVGEGPDDADA-PAVKALDSVNEMLGTPHGLVLQYPAYTTYQIELGEVSTYPPGYKENGG---------------IFCHNNPWVIIAETVVGRG----AQAFDYYKRIPAYRED-ISDTHKLPYVAQMIAGKEAVRAGEAKNSWLTG |
9 | 1qzeA | 0.22 | 0.08 | 2.46 | 1.54 | HHsearch | | ----------SAVTITLKLQQQTFKIRMEPDETVKVLKEKIEAEKGFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTGSEY------------------------ETM------LT-------E---------------------IMS---------------------MGYEREVVAALR-------------------------------------------------ASYNNPHRAVEYLL---T----------------------------------------------------------------------------------------------------------------------------------------------LEFLRDQPQFQNMRQVIQQNPALLPALLQ-------------QLGQENPQLLQQIS--------RHQEQFIQM------------------------------------------------------------------------------------TPQE--KEAIERLKALGF-PESLVIQAYFACEKNENLAANFLLSQNF- |
10 | 2i1kA | 0.09 | 0.06 | 2.41 | 1.01 | FFAS-3D | | ----------KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLEVWFFGLQYTDSKIKLYKKVMQQDVKKENPLQFKFRAK-----------------------------------------------------------------------------FYPEDVADELIQEITLKLFYLQVKNAILSPPETSVLLA-SYAVQARHGDPQRVTDQHKMSREWEQSITNWWQEHRGMLREDAMMEYLKIAQRVRVNKRILALCMGNHELMRRRKPDTIDVQQMKAQAREEKLAKQAQ------------------------------------------------------------------------------REIAARERAEKKQQEYQDRLRQMQEE--MERSQANLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEEQEEVSRIQQELKDSETRRLQEEVEDARRKQDEAAAALLAATTPQHHHVAERADESGGGDLARGPDDLVDPVADRRTLAERNERLHNQLKALKQDLARSCDETKETAMDKIRENVRQG-RDKYKTLREI--RKGNTKRRVDQF------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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