Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSSCCSSSSSSHHHSSSCC MDFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQTEVLLQPNPSARVEEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAEAEKQLGAAERDFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATTVPDFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTRLLLEGISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGRFPGTFVGTTEPASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS |
1 | 4wpcA | 0.04 | 0.03 | 1.30 | 0.83 | DEthreader | | -----------------------------------LNSDVAINALLSRLK-QSLLTCEEFMKFIRKKYAFE-----------------EEHVQELSKQYKHFFNIQNKKMIHEVLGFDGKMAQVKQSYITALQKM-YSEISSLLLTMTKLRKSVKENSKRLEKDVSDAIHSAEKAQSRYNSLCQDWDKLR-TLRGSKTTKEQEEELLRKIDNADLEYKQKVDHSNSLRNTFIKERPRIVQELKDLILEIDTAMTIQLQKYTIWTENLVLNTGVTISSMKSFAGSVSRDLYSFLKYNLIN------------------------------------------------------------------------------------------------ |
2 | 2q13A | 0.07 | 0.06 | 2.38 | 0.92 | MapAlign | | ---DKLPIEETLEDSQTRSLLGVFEED-----------ATAISNYMNQLYQAMHRIYDAQNEL-------------------------SATHLTSKLLKEYEQRFPLDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMF--------PITQFKEDLKEILTLKEVFQIASNDHDAAINRYSRL-----------SKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIAL------LEPLLGYMQAQISFFKMGSENLEEFLANIGTS------------VQNVRREMDSDIETMQQTIEDLEVASDPLYVPDPDPTKFPVNRNLTRKDRQFYFTQGGNLMSQARIDNCSVMAVDCDRRYCFQITSFDKKSILQAEEWICTI |
3 | 2d4cB | 0.27 | 0.16 | 4.81 | 1.24 | SPARKS-K | | --------------QFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPN------PASRAKLSMI-PGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDEIQSALQHHLKKLEGRRLDFDYKKKRQGKIPD-------------------------------------EELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA-------------------------------------------------------------------------------------------------------------- |
4 | 5i6jA | 0.09 | 0.07 | 2.73 | 1.07 | EigenThreader | | ---KK--------DKEIIAEYDTQVKEIRAQLTEQMKCLDQQCELRVQLLQDLQDFFRKKAEIE-----------------------MDYSRNLEKLAERFLAKTQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEVGQQLQDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQELKAIKARNEYLLALEATNASVFKYYIHDLSDLIDQCCDLGYHASLNRALRTFLSAELNLEQSKHEGLDAIENAVENLDATSDKQRLMEMYNNVFCPPMKFEFQPHMGDMASQLCAQQPVTVEDFDVSDCFQYKP----SITKLQAKHDLLQKTLGES---------------------------------- |
5 | 2d4cB | 0.25 | 0.14 | 4.48 | 0.57 | CEthreader | | --------------QFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSM-------IPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGK---------------------------------IPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA-------------------------------------------------------------------------------------------------------------- |
6 | 2d4cB | 0.25 | 0.14 | 4.48 | 1.06 | MUSTER | | --------------QFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSM-------IPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGK---------------------------------IPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA-------------------------------------------------------------------------------------------------------------- |
7 | 2d4cB | 0.28 | 0.16 | 4.95 | 1.53 | HHsearch | | --------------QFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLS-------MIPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGK-------------------------------------IPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA-------------------------------------------------------------------------------------------------------------- |
8 | 2d4cB | 0.28 | 0.16 | 4.80 | 2.07 | FFAS-3D | | ---------------FHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPN-------PASRAKLSMIPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGKIPDEE-------------------------------------LRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEE------------------------------------------------------------------------------------------------------------------- |
9 | 6upnA | 0.72 | 0.43 | 12.14 | 1.29 | CNFpred | | -DFNVKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKIWTEKIMKQTEVLLQPNPNARIEEFVYEKLDRKAPSRINNPELLGQYMIDAGTEFGPGTAYGNALIKCGETQKRIGTADRELIQTSALNFLTPLRNFIEGDYKTIAKERKLLQNKRLDLDAAKTRLK-------------------------------------------------EFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYQYMLDLQKQLGSFPSN--------------------------------------------------------------------------------------------------------------- |
10 | 3qweA | 0.08 | 0.05 | 1.91 | 0.83 | DEthreader | | -----------------------------------IRTKGGVDAALEYAKTWSRYAKELLAWTEKRAS-YE----------------LEFAKSTMKIAEAGKVSIQQSQYYTLFLEHDLSLGTLAMETVAQQKRDYYQPLAAKRTEIE-KWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSKQQRRRRSREEAQAKAQEAEALYQACVREANARQQDLEIAKQRIVSHVRKLVFQGDEVLRRVTLSLFGLRGAQAERGPRAFAALAECCAPFEQRYQEFVRAL--------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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