>Q9NQX0 (178 residues) SVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQ CFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRA FAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | SVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD |
Prediction | CCCCSCCCCCCSHHCHHHHHCCCCCCCCSCCCCCCCSCCCCCHHHHHCHSCCCCCCSCCCCCCSSCCCCCCCCSSCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCCHHHHCCCCCCCCCCCCCCCSSCC |
Confidence | 9882048764512012112033158898216776453453321546510158988126988865234234101103246988802798876504433320101331689992069777641453330100023268988106988775034245200102357878803478524619 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | SVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD |
Prediction | 8551446643331240441323134433250731341244431441333033333263774113033424044032313433315377411302342404413231334332537741230334240441323123333163674323033424144032303422315226633738 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCSCCCCCCSHHCHHHHHCCCCCCCCSCCCCCCCSCCCCCHHHHHCHSCCCCCCSCCCCCCSSCCCCCCCCSSCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCCHHHHCCCCCCCCCCCCCCCSSCC SVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD | |||||||||||||||||||
1 | 2i13A | 0.39 | 0.28 | 8.14 | 1.00 | DEthreader | -----------------------DH-----------DKKDLTRHQRTHTGE--KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH---------------- | |||||||||||||
2 | 5v3jE | 0.26 | 0.26 | 8.13 | 4.32 | SPARKS-K | EKPHKCKECGKAFRQLSLHLLTHAGARRFECKDCKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKGKTFGRG | |||||||||||||
3 | 5v3gD | 0.29 | 0.25 | 7.54 | 1.00 | MapAlign | -----------------------SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGF- | |||||||||||||
4 | 5v3gD | 0.28 | 0.25 | 7.56 | 0.79 | CEthreader | ---------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVGFRNKSHLL | |||||||||||||
5 | 5v3gD | 0.29 | 0.27 | 8.20 | 3.36 | MUSTER | EKPYVCRECGRGFSHLLRHQRTHTGEKPYVCRECGGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT--------------- | |||||||||||||
6 | 5v3jE | 0.26 | 0.26 | 8.13 | 1.39 | HHsearch | EKCFECKECGKAFMRPSHLQRIHTGEKPHTQAGAKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFG | |||||||||||||
7 | 5v3gD | 0.31 | 0.28 | 8.33 | 2.10 | FFAS-3D | ---YVCRECGRGFSHLLRHQRTHTGEKPYVCECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT--------------- | |||||||||||||
8 | 2i13A | 0.33 | 0.28 | 8.43 | 1.15 | EigenThreader | ------FSRSDHLAEHQRTHKP----YKCPECGKSFSDKKDLTRHQRTHTG-EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH---------------- | |||||||||||||
9 | 5v3mC | 0.28 | 0.24 | 7.38 | 5.72 | CNFpred | --CFECKECGKAFMRPS------------------------HLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFT | |||||||||||||
10 | 5v3gD | 0.32 | 0.23 | 6.93 | 1.00 | DEthreader | ---------------Y--R--G-RDK----------SHL--LSHQRTTGEK--P-YVCR-ECGRGFRDSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTH-T-------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |