>Q9NPH3 (127 residues) SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITID VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPR YTVELAC |
Sequence |
20 40 60 80 100 120 | | | | | | SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVELAC |
Prediction | CCCCCCCCSSSCCCCCSSSSSCCCCCSSSSSSSSSCCCCCCCCSSSSSSCCSSCCCCCCCSSSSSCSSSSSCCCCSSSSSSSSSSCCHHHCCCCSSSSSSSCCCSSSSSSSSSSSCCCCCSSSSCCC |
Confidence | 9988899858768997078852993199999997346899996899998994424566632685021343128957999999923246769984799999089529999999983799844664169 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVELAC |
Prediction | 8576633040330675343516345614040303233455441202022455415734553434454444446743221203055036612736020203154344423040455443442314248 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCSSSCCCCCSSSSSCCCCCSSSSSSSSSCCCCCCCCSSSSSSCCSSCCCCCCCSSSSSCSSSSSCCCCSSSSSSSSSSCCHHHCCCCSSSSSSSCCCSSSSSSSSSSSCCCCCSSSSCCC SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVELAC | |||||||||||||||||||
1 | 3f8uD | 0.07 | 0.07 | 2.87 | 1.33 | DEthreader | -PRALLVLTV-LTH-TPAPRVRLGQDALLDLSFAYMPPGPPPFGLEWRRQGHLLPAAQEGAVAFAAWDDEPWGPWTGNGTFWLPRVQPFQ-EGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPPE- | |||||||||||||
2 | 4yfcB3 | 0.18 | 0.17 | 5.36 | 1.10 | SPARKS-K | APLTDKPPKLLYPMELTVQETQLGGSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLENRVWESIRILKEHLGEQEVSISLIVDSVEEGD-LGNYSCYVENGNGRRHASVLLHKR------------ | |||||||||||||
3 | 4yfcB3 | 0.18 | 0.16 | 5.15 | 1.78 | FFAS-3D | APLTDKPPKLLYPMESKVQETQLGGSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENWESDIRILKEHLGEQEVSISLIVDSVEEGD-LGNYSCYVENGNGRRHASVLLHKR------------ | |||||||||||||
4 | 2nziA | 0.21 | 0.17 | 5.50 | 1.60 | CNFpred | ----AMAPHFKEE--LRNLNVRYQSNATLVCKVTGH----PKPIVKWYRQGKEIIADGLKYRIQEFK--------GGYHQLIIASVTDDD-ATVYQVRATNQGGSVSGTASLEVEV---PAKIHLPK | |||||||||||||
5 | 4yfcB | 0.19 | 0.17 | 5.57 | 1.33 | DEthreader | EPLTDKPPKLLYPMKLTVQETQLGGSANLTCRAFFGYSGDVSPLIYWMKGEKFIDLDENRVWESIRILKEHLGEQEVSISLIVDSVEEGDL-GNYSCYVENGNGRRHASVLLHKR------------ | |||||||||||||
6 | 1iraY2 | 0.20 | 0.17 | 5.53 | 1.06 | SPARKS-K | ---KPTRPVIVSPANE-TMEVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV----------- | |||||||||||||
7 | 4yfcB | 0.19 | 0.17 | 5.34 | 0.68 | MapAlign | ---TDKPPKLLYPMELTVQETQLGGSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLENRVWESIRILKEHLGEQEVSISLIVDSVEEGDLG-NYSCYVENGNGRRHASVLLHKR------------ | |||||||||||||
8 | 6efyA3 | 0.23 | 0.18 | 5.69 | 0.44 | CEthreader | ----HFHPVIQVPN--QLVGAPLGTDVQIECHVEASP----KSINYWIKDTGEMIVTSGKYHVQESSQ----SMYETKMSMIVRKFQKDD-VGSYRCIAKNSLGEVDSSIRLYEIPH---------- | |||||||||||||
9 | 3o4oB | 1.00 | 0.87 | 24.47 | 0.93 | MUSTER | SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAK---------------- | |||||||||||||
10 | 3b43A | 0.23 | 0.20 | 6.17 | 0.41 | HHsearch | SLKVKEPPVFRKKPH--PVETLKGADVHLECELQGTP----PFQVSWHKDKRELRSG-KKYKIM---------SENFLTSIHILNVDSAD-IGEYQCKASNDVGSDTCVGSITLKA-PPRFVKKLSA | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |