Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCSSSSCSCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCSSSCCCCCSCCCCCSSCCC MAVTLSLLLGGRVCAAVTRCGFATRGVAGPGPIGREPDPDSDWEPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRRVLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDSESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNFLYRI |
1 | 1zq1C | 0.06 | 0.06 | 2.64 | 0.69 | CEthreader | | ATDGKVETPWGAVGIPTICLEEDAARIIERKDKEVIYRLDRLGIPLIEISTTIHHPEQAKVVAKFIGDALRATKKVKRGLGTIRQDLNVSIKGGARIEIKGVQELDMIPIIIEREVERQLNLLKIRDELRKRGVKPKDIKEEFYDVTDIFENTKSKIIARVIKKGGKVLAIKLPKFRGLIGREIQPGRRLGTEFADRAKK---------YVPGIFHIDELPNYGISQEEVNKVIERLNLSEEDAFVLVAAEEEKAKNALREVIKRAREAIEGVPEETRRALPDGNTEYMRP |
2 | 6yz0A | 0.05 | 0.04 | 2.03 | 0.63 | EigenThreader | | IESKRFQNVITAIIVLNGAVLGLLTDTTL------SASSQNLLERVDQLCLTIFIVEISLKIYAYG------------VRGFFRSGWNLFDFVIVAIALM---------PARTFRIFRVMRLVSVI---PTMRRVVQGMLLAL--PGVGSVAAL---LTVVFYIAAVMATNLYGATFPEWFGDLSKSLYTLFQVMTLESWSMGIVRPVMNVHPNAWVFFIPFIMLTTLTVLNLDAMAITKEQEEEAKTGHHQEPISQTLLHLGDRLDRIEKQLAQN--------------- |
3 | 1vw4a | 0.16 | 0.08 | 2.52 | 0.55 | FFAS-3D | | --------------------GFPKTQVDAPGMYYQPSEATGSVNSETIPRSFMAASDPRRGLDMPVQSTKAKQCPNNGKTYHLGPQEIDEIRKLRLDNPQKYTRKFLAAKYGISPLFVSMVSK---PSEQHVQIMESRLQEIQSRWKEKRRIAREDRKRRKLL-------------------------------------------------------------------------------------------------------------------------------- |
4 | 5n8oA | 0.12 | 0.12 | 4.13 | 0.83 | SPARKS-K | | NQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFVDPEIRMAEWMQTLKEIRAYRDAADQRTEIRTQA----PDVQQAVTQAIAGLSERKVQFTLARTVGILPPERAGIDEAISREQIPLDREKRALSRDIMKQNRVTVHPESVPRTAGYSDAVSVLQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS--QMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQEKLSLKETLTLLDGAAR-HNVQVLITDSGQRTGTGSALMAM |
5 | 4p9tA | 0.15 | 0.06 | 2.10 | 0.49 | CNFpred | | AAVEDVRKQGETMRIASSEFAD-------CSSVKRG------MVRAARALLSAVTRLLILADMADVMRLLSHLK--------IVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKKNA-------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5tw1D | 0.06 | 0.05 | 2.10 | 0.67 | DEthreader | | ATALPVTHI-FKLEKIIFAAYVITS---VDDEMRHTKLAPKQLGSILIR-PMGMV-DFDRSLSDLLKGRFQNLLGKRVDYS----LKLHQC----------EEVIAEHPEPQLV-AVHLPLSAQEALMNLSPASG----VREHDCETERGINVTLADVAFRTLERGHKVRSVLTCTS-ATGVCAMCYGRSMVGIVAAQSIGEPGTQLTGLPRVQLFVIIVR--L--------AGRPV-M--K-------QETRVLAARSDKLNGLENVIPATGYRNIQV------------ |
7 | 6vbu91 | 0.06 | 0.05 | 2.44 | 1.13 | MapAlign | | LCLADVDNGNGQDKIIVGSFMGYLRIFNPHPAQAEDLLLEVHLRDPILQVLHSRKLCVYSVSGTLGNVEHGNQYQIKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSVDMLMVFEQRFLPGSLLPGPLAYSSRTDSFITVSSCHQVESYKYQVLAFAVVDWTLNIGEQAIDICIVSFIQSASSVFVLGERNFF-----------CLKDNGQIQFMKKLDYSPSCFLPYCSVSEGTINTLIGNHNNMLHIYQDVTLK---WATQLPHVPVAVRVGCLIVTLSDDHLQCSY |
8 | 6fmlG | 0.09 | 0.08 | 3.20 | 0.68 | MUSTER | | SATLMNLVMQFR-KVCNHPDLFERADTSSPFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGN----LVAGFRSKYLNHMMNIWTPENIRSSLEGIE---FTWLRFVDTSLQEAYRAVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFT-NI |
9 | 5mrca | 0.13 | 0.06 | 2.13 | 0.70 | HHsearch | | TKSASNYK-G--YLKHRDAPGMYYQPSESATSVNSIPRKAKQCPNV----------LVG--KS-------T----VNGKTYHLGPQEIDEIRKLRLDNPQKYTRKFLAAKYGISPLFVSMVSKP----SEQHVQIMESRLQSRWKEKRRIA--REDRKRRKLLYQA----------------------------------------------------------------------------------------------------------------------------- |
10 | 6vbu91 | 0.07 | 0.07 | 2.94 | 0.61 | CEthreader | | CLADVDNTGNGQDKIIVGSFMGYLRIFNPHPAQAEDLLLEVHLRDPILQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQYQIKLMYEHNLQRTYGSFGGVKGRDLICIQS--VDGMLMVFEQESYAFGRFLPGSLLPGPLAYSSRTDSFITVSSCHQVESYKYQVLAFAVVDWTLNIGEQAIDICIVSFIQSASSVFVLGERNFFCLKDNGQIQFMKKLDYSPSCFLPYCSVSEGTINTLIGNHNNMLQDVTLKWATQLPHVPVAVRVGCLHDLKGVIVTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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