Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCSCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCSCHHHHHHHHHC MGNCAKRPWRRGPKDPLQWLGSPPRGSCPSPSSSPKEQGDPAPGVQGYSVLNSLVGPACIFLRPSIAATQLDRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMMSR |
1 | 2f2pA | 0.33 | 0.20 | 6.01 | 0.67 | DEthreader | | ------------------------------------------------------------------------D--TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEDGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV-FD-----KDGYISAAELRHMT-GEKLTDEEVDEMIREADIDG---DGQVN-YEEFVQMMT |
2 | 6xyrA2 | 0.40 | 0.30 | 8.71 | 1.41 | SPARKS-K | | -----------------------------------------------------MARWKKAFIAVSAANRFKKIQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVGNGTIDFPEFLTMMARKM-----KDTDEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA |
3 | 2jnfA | 0.29 | 0.20 | 6.09 | 0.66 | MapAlign | | --------------------------------------------------------------------MGDVSKLSSNQVKLLETAFRDFETPGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG |
4 | 2jnfA | 0.29 | 0.20 | 6.09 | 0.44 | CEthreader | | --------------------------------------------------------------------MGDVSKLSSNQVKLLETAFRDFETEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELD-ETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG |
5 | 3ox5A | 0.77 | 0.53 | 14.92 | 1.29 | MUSTER | | ----------------------------------------------------------------------MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR |
6 | 3evuA | 0.36 | 0.33 | 9.89 | 1.06 | HHsearch | | YGKLTLFICTTGKL-PVPWPTTTHMKFFKSAMPEGYIQERTIAEVK-FEGDTLVNR---------IELKGIDFKLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVGNGTIDFPEFLTMMARK----MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA |
7 | 3ox5A | 0.75 | 0.51 | 14.55 | 1.78 | FFAS-3D | | ----------------------------------------------------------------------MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR |
8 | 3u0kA | 0.34 | 0.30 | 8.98 | 0.90 | EigenThreader | | GGGGTGGSMNSLIKENSRTFIKYPKGIPDFFKQSFPEGFPSNGAVMQK------KTKGWEPTRD---------QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTPEFLIMMAR----------KEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT- |
9 | 3ox6A | 0.78 | 0.53 | 15.04 | 1.18 | CNFpred | | ----------------------------------------------------------------------MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR |
10 | 6u2mA | 0.19 | 0.13 | 4.09 | 0.67 | DEthreader | | ---------------------------------------------------VKAMGHRK-FGN--PF-RPKETFQAL-VFEGTLPMGVVR---HYLF--LLF-WGTPGV--PPAEAARLAS----WSAFFIR--I--WEWPFAR-DQ-LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS--LGQNPTAELQDMINEVDADGNGTIDFPEFLTMMAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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