>Q9NP99 (234 residues) MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRD GEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPK EPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTKALCPLYTSPRTVTQAPPKST ADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKSLVFSVLFAVTLRSFVP |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTKALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKSLVFSVLFAVTLRSFVP |
Prediction | CCCCCHHHHHHHHHHHCHCSSCSSSCCSSSSSCCCSSSSSSSSCCCSCCCCSSSSSSCCCCCCCSSSSSSCCCCCCCCCSSCCSSSSSSCCCCCSSSSSSCCCCHHHCSSSSSSSSCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCC |
Confidence | 962425777554435200311035265479834831999987578332555279998389997579999848887503334344999971999889999868993665899988746999862466689999970356787888277876465688777707887678970237886776665689975343567777767631017899999999999998777530034589 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTKALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKSLVFSVLFAVTLRSFVP |
Prediction | 654230120100000121324352446524244433030313054541442200101235654021002124444544534411010313574220102046035601030110024346443232330301023333333336444445344343333443434443444344443544443434445343444344433310102322001333232131001000335448 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCHHHHHHHHHHHCHCSSCSSSCCSSSSSCCCSSSSSSSSCCCSCCCCSSSSSSCCCCCCCSSSSSSCCCCCCCCCSSCCSSSSSSCCCCCSSSSSSCCCCHHHCSSSSSSSSCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCC MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTKALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKSLVFSVLFAVTLRSFVP | |||||||||||||||||||
1 | 7kpbH | 0.13 | 0.11 | 3.85 | 1.00 | SPARKS-K | -------------------DVQLVESGGGLVQPGRSLKLSCAASGFTFSAYYMAWVRQAPTKGLEWVASINYDGANTFYSVKGRFTVSRDNARSSLYLQMDSLRSEDTATYYCTTEAYGYWFGYWGQGTLVTVSSAKTTPPSVYPNSMVTLKGYFPEPVTVTLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR----------------- | |||||||||||||
2 | 6vy4C | 0.11 | 0.09 | 3.27 | 1.00 | SPARKS-K | -------------------QVQLVQSGAEVKKPGSSVKVSCKVSGGIFNRETINWVRQAPGQGLEWMGRITPIVDVPNYPFRGRVTITADKSTSTVYMELSGLRFEDTAIYFCARFRGHNYFDPWGQGTLVTVSSASFGPSVFPLAPSALVKDYFPEPVTVSWNSGALTSGVHTFPAVLQLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV----------------- | |||||||||||||
3 | 1q8mA | 0.98 | 0.50 | 13.89 | 1.56 | FFAS-3D | ------------------RAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTLE-------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 6jxrm | 0.16 | 0.14 | 4.67 | 1.48 | FFAS-3D | ---------------------VEQDPGPLSVPEGAIVSLNCTYSNSAFQY--FMWYRQYSRKGPELLMYT----YSSGNKEDGRFTAQVDKSSKYISLFIRDSQPSDSATYLCAMSKGYSTL-TFGKGTMLLVSPDIQNPDLRDSKSSDKSVCLSQTNVSQSKDSDVYITDKTVLDMRSMDFNAFNNSIIPEDTFFPSPESSFQNLSVIGFRILLLKVAGFNLL--MTLRLW-- | |||||||||||||
5 | 4p5tA | 0.20 | 0.11 | 3.41 | 1.36 | CNFpred | --------------------QVRQSPQSLTVWEGETAILNCSYENS--AFDYFPWYQQFPGEGPALLIAIRS---VSDKKEDGRFTIFFNKREKKLSLHITDSQPGDSATYFCAASRDSGQKLVFGQGTILKVYLHI-------QNPDPAVYQLR------------------------------------------------------------------------------- | |||||||||||||
6 | 5fhxH | 0.11 | 0.07 | 2.46 | 0.83 | DEthreader | ----PELVKPASSPTSSSEVQL-KESGPGLVAPGGSLSITCTVSGFSLTDSSINWVRQPPGKGLEWLGMIWDGRIDYADALKSRLSISKDSSKSQVFLEMTSLRTDDTATYYCARDGYFPYMDFWGQGTSVTVSS-RTS-------ATKGPSNTKV--K--------------------------------------------------------------------------- | |||||||||||||
7 | 4gftB | 0.15 | 0.07 | 2.46 | 0.55 | MapAlign | --------------------VQLQESGGGTVQPGGSLKLSCSAAPRAFSNYAMGWFRQAPGQEREFVAGITGSGRSQYYAVKGRFTISRDNAMNAVYLQMNSVKAEDTAVYYCAARVVPKGYVYWGQGTQVTVSSH-------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 4p9hH | 0.11 | 0.09 | 3.27 | 0.33 | CEthreader | -------------------QIHLVQSGTEVKKPGSSVTVSCKAYVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLPPISSLEIKNLTSDDTAVYFCTTTSTYDAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPYICNVNHKPSNTKVDKRVE---------------- | |||||||||||||
9 | 4ffvD | 0.15 | 0.12 | 4.18 | 0.86 | MUSTER | --------------------EFQLQSGPELVKPGASVKISCKASGYSFTDYNINWMKQSNGKSLEWIGVVIPKYGNYNQKFQGKATLTVDQSSSTAYIQLNSLTSEDSAVYYCTRFR-DVFFDVWGTGTTVTVSSAKTTAPSVYPLAPSLVKGYFPEPVTLTNSGSLSSGVHTFPALLQSGLYTLSSS-VTVTSNTWPSQT-------NVAHPASSTKVDK---------KIVP | |||||||||||||
10 | 5xsyB | 0.13 | 0.09 | 3.09 | 0.44 | HHsearch | --------------------ACVEVDSDTEAVVGHGFKLGCISCKMVQASATVDWWFMAKGEEFSHIYSYIDMTGVNDERFLDRLNWMGSFDLQDGSIYILNVTLNDTGTYRCYFDRTYEFRTNINKTITLNVVPKATRGTA-------------------------------------------S---------------ILSEVMMYVSIIGLQLWLLVEMVYCYRKIAAAG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |