Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCSSSSSCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MPDELTEPGRATPARASSFLIENLLAAEAKGAGRATQGDGSREDEEEDDDDPEDEDAEQARRRRLQRRRQLLAGTGPGGEARARALLGPGALGLGPRPPPGPGPPFALGCGGAARWYPRAHGGYGGGLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEASELAEVPAAAGETRGGVGVGGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLSPPGAQRLVRVPVLYHESPPAAAAAGPPATLPFPLAPAAPAPPPPLLGFSGALAYPLAAFPAAASVPFLRAQMPGLV |
1 | 1vt4I3 | 0.13 | 0.13 | 4.57 | 1.16 | CEthreader | | FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 5yfpB | 0.08 | 0.08 | 3.12 | 1.15 | SPARKS-K | | IWNSLINSNFNIPQETILSLFSKLLNLENFI---------------KNTTSSSNENPILRWMSIKMNGFQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIISDTGKD--SEGLKSTVEPNKVNTISGTSYLNLNCQPSSCDQFIEFWEHIEKFLDGTYQNSIINEKRKENILIGDSNIIESYQKSLILKEEQRLKGEEFITSVSQNLNKDSGSPLDYGFIPPNCNGLSCLRYLPKIVEPILKFSTELAQLNITTNGITICRAISSTKLRDISNFYQLENWQVYETVTFSSKSQDSSKNLTFEYGVTQFPEIVTSFVSIKTTRDLLFAYE |
3 | 1vt4I3 | 0.12 | 0.12 | 4.18 | 1.26 | MapAlign | | IGHHLKNIEHPERMTLFRVFLDFRFLEQKIRHDSTASILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 2cufA | 0.29 | 0.07 | 2.01 | 1.48 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACRVTSLKVYNWFANRRKEIKRRANIALESSGPSS-G------------------------------------------------------------------------- |
5 | 6ld3A | 0.10 | 0.10 | 3.72 | 0.66 | CEthreader | | EKVDTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKRSRAIWYMWLGARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQRGSGQTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHLKDGRSIVVPCRHQDELIG |
6 | 6gmhQ | 0.15 | 0.14 | 4.76 | 0.63 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGESCYQLARSFHVQEDYDQAFQY---------YYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAAS |
7 | 1pufA | 0.35 | 0.07 | 2.23 | 0.97 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR----------------------------------------------------------------------------------- |
8 | 5voxO | 0.07 | 0.06 | 2.62 | 1.13 | SPARKS-K | | LPQNAQPVTAPGSKT-----DSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMFQWQTRKFKLDKSESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPK---------SLKSDFEKSYETLSKNVVPASASVIAEDFNVHLFKKNVQEFTTAAREKKFILKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYLPPHFNIKIIAVELIDAFGFLGGNAFMKDKK--GKINKQDTSLHQYASLVDTEYEPFVMYIINL------------- |
9 | 6es3K | 0.40 | 0.08 | 2.46 | 0.82 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ---------------------------------------------------------------------------- |
10 | 4o9xA | 0.05 | 0.04 | 1.96 | 0.83 | DEthreader | | LPLPISARGYAPAFT--LNYNSGAGLGW--------AYQDFSPRHHAHHNRLDILFQLQMADVQGLGVRSSSQFWVCYL-IHTLWQTETELVTTLREKWYAIDNALSTAFAGFSPRFTPSRYWFRALKLRSQ------E-R-Y----IASDPQCS-Q-PRR-QPAINLY----------LLANSYDFSVYDIIQYHLGNPLNGRPYERLLS-RLIW-AG-----TEAEKDHNLAGQC-VR-H-YDT-GVTRLQSS--QLLIDTQEANWTG---------MLAIYTTDANIQWLVIIKEEHGNTVGEAGRAQVRVLHWES----NNQLRYSKTIRERDA---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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