>Q9HCZ1 (186 residues) SNQNYPDIDDALEKNKEIQDKHLTQTVFFSNKTLITERENVFGKTLNLGMNSVPSRKMPY KCNPGGNSLKTNSEVIVAKKSKENRKIPDGYSGFGKHEKSHLGMKKYRYNPMRKASNQNE NLILHQNIQILKQPFDYNKCGKTFFKRAILITQKGRQTERKPNECNECRKTFSKRSTLIV HQRIHT |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | SNQNYPDIDDALEKNKEIQDKHLTQTVFFSNKTLITERENVFGKTLNLGMNSVPSRKMPYKCNPGGNSLKTNSEVIVAKKSKENRKIPDGYSGFGKHEKSHLGMKKYRYNPMRKASNQNENLILHQNIQILKQPFDYNKCGKTFFKRAILITQKGRQTERKPNECNECRKTFSKRSTLIVHQRIHT |
Prediction | CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSCCCCCCCSSCCCCSSCSSSCCSCCCCCCCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCCCSSCCCC |
Confidence | 999872001023444554232012024369887556467641662344312453799881268888643441011002022237877355454321412235989811788887414532111211211588982378788644332222114122068898027877764234333221201369 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | SNQNYPDIDDALEKNKEIQDKHLTQTVFFSNKTLITERENVFGKTLNLGMNSVPSRKMPYKCNPGGNSLKTNSEVIVAKKSKENRKIPDGYSGFGKHEKSHLGMKKYRYNPMRKASNQNENLILHQNIQILKQPFDYNKCGKTFFKRAILITQKGRQTERKPNECNECRKTFSKRSTLIVHQRIHT |
Prediction | 864525506621542562364234233244634305311120344140422330345221447451210334140340332241422043315134444141213215465211202231403343415112321536743212233040344441532233144665421223314034444268 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSCCCCCCCSSCCCCSSCSSSCCSCCCCCCCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCCCSSCCCC SNQNYPDIDDALEKNKEIQDKHLTQTVFFSNKTLITERENVFGKTLNLGMNSVPSRKMPYKCNPGGNSLKTNSEVIVAKKSKENRKIPDGYSGFGKHEKSHLGMKKYRYNPMRKASNQNENLILHQNIQILKQPFDYNKCGKTFFKRAILITQKGRQTERKPNECNECRKTFSKRSTLIVHQRIHT | |||||||||||||||||||
1 | 6qvmA | 0.04 | 0.03 | 1.72 | 0.83 | DEthreader | -SGLSAGKKCQSHGCEACHGGIAASATENKHGISLQTICLECHSQDRTTVTCHSPHSEKGY------GKQLRKPELCMEHQKEVFTGVYNPMGSAECVTHMGYHYFKGISIDKASYNSCS--A--DA--NAVKAW---------TDKVDTRVNNINQLTTYA-AYNDPNYKADTLAGIVA------ | |||||||||||||
2 | 5v3gD | 0.23 | 0.19 | 5.91 | 4.36 | SPARKS-K | ------------------------------PGSEKPYVCRECGRGFSNKSHLLHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKP-YVCRECGRHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT | |||||||||||||
3 | 5v3jE | 0.23 | 0.23 | 7.06 | 0.97 | MapAlign | -----FPSNAQLSLYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHHTGETPYKCKECGKGFARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH- | |||||||||||||
4 | 5v3gD | 0.22 | 0.19 | 6.12 | 0.74 | CEthreader | EKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQ-------------------RTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT | |||||||||||||
5 | 5v3gD | 0.24 | 0.20 | 6.37 | 2.92 | MUSTER | ---------------------------PGSEKPYVRECGRGFSNKSHLLHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTCGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT | |||||||||||||
6 | 5v3jE | 0.23 | 0.23 | 7.09 | 1.45 | HHsearch | CGKAFPSN-AQLSLHHRVHTDEKCFECKECGKAFRYFECKDCDKVYSCASQLSHTGEKPHKCKECGKGFISDSHLLRHQSVHT-GETPYKCKECARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT | |||||||||||||
7 | 5v3gD | 0.23 | 0.19 | 6.07 | 1.85 | FFAS-3D | -----------------------------EKPYVCRECGRGFSNKSHLLHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTCGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT | |||||||||||||
8 | 5v3gD | 0.16 | 0.13 | 4.46 | 0.85 | EigenThreader | RECGRNKSHLLRHQRTHTG----EKPYVCRECGRGFR-----DKSHLLSHQRTHTGEKPYCRECGRGFRDKSNLLSHQRTHTG--------------------EKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEK--PYECGRGFR-NKSHLLRHQRTHT | |||||||||||||
9 | 5v3gA | 0.27 | 0.19 | 5.78 | 6.73 | CNFpred | -------------------------------------------------------SEKPYVCRECGRGFSNKSHLLRHQRTHECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHT | |||||||||||||
10 | 6oiuA | 0.04 | 0.03 | 1.49 | 0.83 | DEthreader | --------DLYDDRTVRPKEN-LQLM----------------------KSGALLVAGLFSSLTWALNVVCAKFNAALLLATTDAEYQ-----RILNVVGHEYHQTGQLTL--EGLTVFRDQLAEVIRMYHTLIKVGLIVLSFLRDFDDFAKWQAATLIYAFQTLLE------IQAYLRLNVILYLA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |