Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCHHHHHHHHHHHCHHHSSCCCCCCCCC SKTGLSTSGNVEKNKAVKRETEASSINLSVYEPFKVRKAEDKLKESSDKVLENRVLDGKLSSEKNDTSLPSVAPSKTKSSSKLSSCIAAIAALSAKKAASDSCKEPVANSRESSPLPKEVNDSPRAADKSPESQNLIDGTKKPSLKQPDSPRSISSENSSKGSPSSPAGSTPAIPKVRIKTIKTSSGEIKRTVTRVLPEVDLDSGKKPSEQTASVMASVTSLLSSPASAAVLSSPPRAPLQSAVVTNAVSPAELTPKQVTIKPVATAFLPVSAVKTAGSQVINLKLANNTTVKATVISAASVQSASSAIIKAANAIQQQTVVVPASSLANAKLVPKTVHLANLNLLPQGAQATSELRQVLTKPQQQIKQAIINAAASQPPKKVSRVHLFIVHKLKEPQPVSKQNGAGEDNQQENKPSHEDESPDGAVSDRKCKVCAKTFETEAALNTHMRTHGMAFIKSKRMSSAEK |
1 | 4gwpB | 0.09 | 0.08 | 3.12 | 1.32 | SPARKS-K | | DDNIETVMTQEQFVKRRRDMLEHINLAMNESSEFVSLLLSVKESTGMSSM--SPFLRKVVKPSSLNSDKIPYVAPTKKEYIELDILNKGWKLQSLNESKDLLRASFNKLSSIQSISNKDVIFKIRDRTSGQKLLAIGYEDSGSTYKHDRGIANIRNNIESIPHGTDFVHSVKKFLRVRIFTKIESEDDYILSGESV-MDRDSESEEAETKDIRKQIQLLKKIILISYGVSIENEELPNEKFEIELLSLDIVNHEQDLPKINDKRANLMLVMLRLLLVVIFKKTLGLINLNVDDDILIIRPILGKVRFANYKLLLKKIIKDYVLDIVPGSSITETEV-EREQPQENKNIDDENITKLNKEIRAFDKLLNIPRRELKINLPLTEHKSPNLSLMLESPNYCALIHIKFSAGTEANAVSFDVE-------------------DFLHFIVAEYIQQKKV------------- |
2 | 5mkl1 | 0.08 | 0.08 | 3.06 | 1.53 | MapAlign | | -----------IENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSLVLKDCTEYREGTSDPVAKYGRVLIRGSNILFISIDYESIMKIEPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRVLIRGSNILFISIDYESIMIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSLFISIDYESIMKIENPLKSLKVLVKLKNGEEYVQSDGTMNLVLKDCTEYREGTSDPVAKYGRVYESIMKIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRVLIRGSNILFISIDYESIMIENPLKSLKTIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRVLIRGSNIIMKIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPV |
3 | 3fm8C | 0.05 | 0.04 | 1.94 | 0.85 | CEthreader | | -------------------------------------------------------------------------HHSSGRENLYFQGMAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKS-----------------------VRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNREPKA-------VMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHF |
4 | 5wbiA | 0.08 | 0.07 | 2.86 | 0.95 | EigenThreader | | GSSGSSGSSRD--CILLAACDVHETLPQSVEFPADVFTSCLTTPIKMALKWFCRRSLLKEIIDESLIDRIPGRQNDRKTLLGELNWIFTAVTDTIAWNVLPANCNPPMLPPTHQHHMWDAWDMAAEICLSQLPQLVLDPSTEFQPSPAFEVWLDHGSEHKKPPEQLPIVLQVLLS----------------------QCHRFRALVLLGRFLDMVFIWTKILALDKSCQIDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFVLAVIVD---GHRRGQEACLEA-------------NLIGVCLGHLLQWLCLCLGKLWEDF---MEAQIMGREANAFEKLAPLLSEPQPEVRAAAVFALGTLLDKIRAEDAIIKSLLDVVSDGSPLVR-------AEVAVALARFAFGHKQHLKLAAASYWAVYSQCVRAMFALAKDPSPRIASLGRRVLSIIGIEERSLLPLSTIYG |
5 | 4gwpB | 0.10 | 0.09 | 3.38 | 0.50 | FFAS-3D | | -------------NENGETDDNIET-VMTQEQFVKRRDMLEHINLAMNESFVSLLLSSRKVVKPSSLNSDKIPYVAPTKKEKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIFKIRDRTSGQKLLAEDSGSTYKHDRGIANIRNNIESIPHGTDFVHSVKKFLRVRIFTKIESEDDYILSGESVMDRDSESEEAETKDIRKQIQLLKKIIFEKEECALLISYGVSIENENKVIIELPNE------KFEIELLSLDDDSIVNHEQDLPKINDKR-------------ANLMLVMLRLLLVVIFKKTLRSGLINLNVDDDILIIRPILGKVRFANYKLLLKKIIKDYVLDIVPGSSITETEVEREQPQENKNIDDENITKLNKFDKLLNIPRRELK------INLPLTEHKSPNLESPNYCNALIHISFDVEDFLHFIVAE----YIQQKKV----- |
6 | 6zywY | 0.08 | 0.07 | 2.92 | 1.26 | SPARKS-K | | DDEGVPELNIDENQQYKDQDFLANLEVMQLITKDYKNMTEEFIQDYIFQKVSKVYAGFQIPESEITLDEVKIDFKDTISFKLTPY--FFMVRIEQKNIKSQILNNTVLLLTKEIPYFDLWNCQNDYSEKIEKMKKRILWEPLGKQISDELPKNRIFVQT--GRKSNYGFDIPIMQSYYMLRIETQLGWFILFWLIFKVDSNITFNSISKDTIASFFKIKNYFEENQIKYEYQVDIPAIFQESQIAKKQILNNEQFFISYIESKLMILNQMKDLKLSAYKNLYEQMQIVENHIGVILVNGSYCSGKRKFAENLIRFGNLRLHLYKFDLNEMSELTE-----------KSYLSGLLKFASEKKIQNTDVIVASVPHFINKSEKISNAFYIRTIATKININNIYSN------FNKNPVNNVFTYGVEGYSQFLLLDTYNNYDADVNALNKTLSGVLAKIYKIMNNILNPA |
7 | 4j1qA | 0.08 | 0.02 | 0.75 | 0.58 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HIIVLFETERSVTDSIASHMKDA--RVITLNEAVGHIAER-YQCYMQNIFELLQSKVRKLSAG----------------------------RIIIQAIVPLEKEKQLFA----------------------------------GVSGLFKTAEIEFSKLTAQVIEIEKPEEMID |
8 | 6h02A | 0.04 | 0.02 | 1.20 | 0.67 | DEthreader | | -----------GLSESHEQCIQWIVKLVCESIGDLLKVILELIIYPEGKLPHW---------------VSDFVDTFRPTA-----------------------------------------------------------------------------------------------NSGAICWKLDPATL---------------------------------------------------PQTALLRLVLEDQLVDLVYAMSQLWQPQNLLLTAKSLIHSTIKLAHAK------LVTYSRLLVYMGIKFISQLLPTVFKSAILHTLLEMFSYRMHRCSTALRTSEELNRAHNWAVPQESRFNLKKNVECFDFLVLCIIQLVFDYHDRTWR-FPNPAAAMNAIG------TALPEPYWIVLRIVVILAHVWHHSSIGQLSILVGPFLQ-------------------- |
9 | 2pffB | 0.03 | 0.03 | 1.91 | 1.37 | MapAlign | | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDGEKGKRIRENYSAMIFETIVDGKLKTEKIFKQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAASIESLVEVVFYRGMTMQVAVPRDELGRS |
10 | 2nbiA | 0.11 | 0.10 | 3.81 | 0.98 | MUSTER | | QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICS---PTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNSPDNPMFTPSPDGSPPSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNPFECSPDNPMFTPSSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDN-----PVCSPTMMPSPLPSPTE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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