Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC MTMGDMKTPDFDDLLAAFDIPDMVDPKAAIESGHDDHESHMKQNAHGEDDSHAPSSSDVGVSVIVKNVRNIDSSEGGEKDGHNPTGNGLHNGFLTASSLDSYSKDGAKSLKGDVPASEVTLKDSTFSQFSPISSAEEFDDDEKIEVDDPPDKEDMRSSFRSNVLTGSAPQQDYDKLKALGGENSQAADTSGQKTCTICQMLLPNQCSYAKDPDLKEMTDATNEEETEIKEDTKVPSPKRKLEEPVLEFRPPRGAITQPLKKLKINVFKVHKCAVCGFTTENLLQFHEHIPQHKSDG |
1 | 4nl6A | 0.07 | 0.07 | 2.75 | 1.10 | SPARKS-K | | EQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTP----------KRKPAKKNKSQKKQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIK--PKSAPWNSFLPPPPPMPGPRLGPGKPGL-KFNGPPPPPPPPPPHLLSCWLPPFPSG-PPIIPPPP-PICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN------ |
2 | 1vt4I | 0.06 | 0.06 | 2.73 | 1.08 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 1vt4I3 | 0.06 | 0.06 | 2.73 | 0.67 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5nnpA | 0.05 | 0.05 | 2.25 | 0.57 | EigenThreader | | HYEDKQYKRGLKAAEQILKKNPKHGDTMSMKALILNAQGKTEEAFALAKEALTIDMKSYI------CWHVYGILYRTNKNFDEAIKAYKFALKLEPESHQIQRDLAVLQIQMRDYAGYVQSRLNMLKARPQIRQNWTALAIAYHLEGNLEKAEHILTTYEKSLTTPPPKTDLEHSEALLYKNTIIAERGDIERALQHLETDCKHCLDRLAVMELRASYLSKLARKDEAAKAYRALLDRNPEHYYLAQHYNYYMSRDKNVDFHMTK---ARIFKHQGDLAKAAETMDYARSLDPKDR |
5 | 1zu1A | 0.14 | 0.05 | 1.84 | 0.34 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------NGDALDLPVGKDAVNSLIR------ENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRS----------------KCCPVCNFSSPVVAESHYIGKTHIK-- |
6 | 4btgA3 | 0.12 | 0.11 | 3.98 | 0.96 | SPARKS-K | | NLKVKDLNGSARGLTQAFAI-GELKNQLSVGALQLPLQFTRTFSASMTSELLWEAY--------VYRVGRTATYPSPSTPKELDPSARLRNGILFIRAEVIFSDEFIEAMSEVSPFKLRPIN-ETTSYIGQTSAIDHMGQPSHVVVYEDWQAKEITAFTPVKLANNSNQRVEPGISDRMSATLAPIGNTRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARKRSMFNAVMHYAVAHNPEVQGVAAEQGSLYLVWNVIPVGYNTPEPLEAIAYNKPIQPSE |
7 | 1hr6B | 0.11 | 0.02 | 0.85 | 0.28 | CNFpred | | ----------VEDIGRQVVTTGRLSPEEVFEQVDKITKDDIIMWA-----------NKPVSMVALGNTSTVPNVSYIEEKLNQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2oajA | 0.06 | 0.04 | 1.95 | 0.83 | DEthreader | | AIKEMRFVKGDASLDWNPRDITVLISY-EYVTFIYELPPPGGDFSE-------PKVIQSL------IITIHENTVF--SSTNAAKISKVYWMLISHKSRGNQSLTM--KIFPLPTN-----ILPIPRPYFAG---------------------LYPSGIFTDNSKAKLAVDKISTSAICIVCGTMGEVTNVTSKGPIHKID------CLATIPKMI-GIVLITDIRLITHKGFKY-P------LAA-TGLSYISLTVIIT-LEINGH-----------AAKYITESIRVQASLFPV |
9 | 1vt4I3 | 0.06 | 0.06 | 2.73 | 0.92 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 2atyA | 0.12 | 0.12 | 4.26 | 0.66 | MUSTER | | IRYGTFRLIGEKSLLCITKDKVDGAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDS---VTFACKTNFSMNGNKANNMWGPTRLPTCVSVFPLEGSIEGRGGVPRDCGCKPCICTVPEVSSVFFPPKPKDVLTITLTVVDISKDDPEVQDDVEVHTAQTQPREEQFNSTFRSVSELP--MHQDWLNGKEFKCRVNSAAFPAPIETKGRPKAPQLYTIPPPKEQMAKDKTDFFPEDITVEQPAENYKNTQPIMNTNESYFVYSKLNVQKSNTC--SVLHEGLHNHHTEKSHSPG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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