Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TQEDKRRDVDLDLSDKDYSSDESIMESIKHKVSEPSRSSSLSLSKMDFDDERTWTDLEENLCNHDVVLGNESTYGTPQTCYPNNEIGILDKTIKRKIAPVKRGEDLSKSRRSRSPPTSELMMKFFPSLKPKPKSDSHLGNELKLNISQDQPPGDNARSQVLREKIIELETEIEKFKAENASLAKLRIERESALEKLRKEIADFEQQKAKELARIEEFKKEEMRKLQKERKVFEKYTTAARTFPDKKEREEIQTLKQQIADLREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVMERFRLDAWKRAEAIESSLEVEKKDKLANTSVRFQNSQISSGTQVEKYKKNYLPMQGNPPRRSKSAPPRDLGN |
1 | 7apkG | 0.15 | 0.06 | 1.98 | 1.07 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------AGDDRRINLLVKSFIKWYSQYQRMLSTLSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHKKQILQAKRIRKNRQEYDALAKVIQHHETLKELEALGKELEHLSHIKESVEDKLELR----RKQFHVLLSTIHELQQTL--------------------------------------------------------------------------- |
2 | 4tqlA | 0.14 | 0.08 | 2.77 | 1.01 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG----------------------------------------------- |
3 | 6rw8A | 0.05 | 0.05 | 2.31 | 1.08 | MapAlign | | YFWELFYYTPMMVFQRLLQEQNFTESTRWLRYIWNPAGYSVQGEMQDYYWNVRPLEEDTSWNANPLDSVDPDAVAQHDPMHYKVATFMKMLDLLITRGDSAYRQLERDTLNEAKMWYVQALTLLTQRLPSMLLSAAITASQGGGDLPHAVMPMYRFPVILENAKWGVSQLIQFGNTLLSITERQDAEALAEILQTQGSELALQSIKMQDKVMAEIDADKLALQESRHGAQSRFDSFNTLYDSAIGIEISASATRIAADKISQSEIYRRRRQEWEIQRNNAEAEIKQIDAQLATLAVRREAAVLQKNYLETQQAQTQAQLAFLQSKFSNAALYNWLRGRLSAIYYQFYDLAVSLCLMAEQTYQYELNNAAAHF |
4 | 6z6fC | 0.11 | 0.10 | 3.72 | 0.59 | CEthreader | | LYNEKHKFPNYTGYSKDDYDYSVKRNLKKRKINTDDWLFLATTKHLKHDQYLLANYDIDMIISFDPMLEVELPALQVLRNNANKDIPIIKLLVQNSPDHYLLDSEIKNSQEYEEIKSSLLYFLQARWQPQLTKLQYSSTELPLWDGPLDIKTYQTELMHRAVIRLRDIQDEYAKGTVPLYEKRLNETQRQNQLDEIKNSVGLTFKKKQEVEKSINDSEKRLKHAMTESTKLQNKINHLLKNRSNTISSENHLEEGSALADKLKEYIDKNATLFNKLKELQQANAEKSKLNDELRSKYQIESSKAAESAQTLKILQESMKSLENEVNGPLTKFSTESQNDFQSLKARNKFLKNYITL---------------- |
5 | 6bk8U | 0.08 | 0.08 | 3.01 | 0.90 | EigenThreader | | ETSRIFWLFQRCLKSCVRDCDRICLSYLELAIEMIRHALASSLMKM----EMHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILERYQQKRNESLATLAL----NITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFLILSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQMAENFALFLQNESFQVYEKTIQYELWIEYLEVATSHHIRFLFEKALKNLCSRLQLWRMCISKAESTLGPSVTRELYQECIQILPNSKAVEFVIKFSDFESSIGETIRAREILAYGAK |
6 | 4cgkA1 | 0.13 | 0.06 | 1.97 | 1.04 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------TAQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNRVAAMSEIVSANNKMLEQQKADKKAISEKQVAN-----NDAINTVIANQQKLADDAQALTTKQAELKAAELSLAGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASAN------------------------------------------------- |
7 | 6yvuB | 0.11 | 0.10 | 3.80 | 1.01 | SPARKS-K | | LKEMQKVLNAHRQRAMEARSSKSKVLTALSRLQKSGRIRLGDLGVIDVDTVECAQHCIDYLRKNKLGYARFILLDRLRQFNLQPISTPKNPKFSNAFYSVVDGKLIDISGTNHVAK----------GLMKLKVDDYTSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEMKIIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNTLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSL |
8 | 5xg2A | 0.14 | 0.08 | 2.76 | 0.77 | CNFpred | | ----------------------------------------------------------------------------------------LIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRA----------EEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSISFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRELDTLIERERGELAKLRGRIERLERKRDKLKKALNPEARELTEKIRAVEKEIAALREELSRVEGKLEGL---------------------------------------------------------- |
9 | 7kogB | 0.07 | 0.04 | 1.66 | 0.67 | DEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------QIEGGNIHIEKKKRLEVEKDELQAALEEAEAALEQEENKVLRSQLELSQVRQEID-RRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELGDAHEQINELAAQATSASAAKKL--L------------------ |
10 | 3jbhA | 0.07 | 0.06 | 2.53 | 1.00 | MapAlign | | RTVQIYKGRRRTEVPPHLFAISDGAYSAMLANRENQSMLITGAFGNAKTVRNDNSSRFGKFIRIHFGPMGKLAGADIEHEYKTDVYKITASCMHLGEMKFKQRPREEQAEADGTEEGERVAHLLGVNAADLYKNLVKPKIKVGNEMVTQGRNATQVSYSVGGLAKAMFDRTFKWLVKRLNETLKEFKKLQEQRVALLVIQRNLRKFLTVEDELKALEEKLKKALESLEKEEKVRKDIEVQNVKLLQEKNDLFLQLESERSGAGDVEERLTKAISMKNDLEGQVQELQERLSREEDAHSNLSSVRKKLDGEISNLKKEIEDLQ-------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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