Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCSSSSSSSCSSSSSSCCCSSSSSSSCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCHHHHHHHHHHHCCCCCCSSSCCCCSSSSSSSCCCCSSSSSSCCCCCSSSSSSSSSSSSCCHHHHHCCCCCCCCSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC MSPRGTGCSAGLLMTVGWLLLAGLQSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAENYAPPETEDVSNRNVVKEVEFGMCTVTCGIGVREVILTNGCPGGESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNRFKYMWKLLRQDQQSIILVNDSAILEVRKESHPLAFECDTLDNNEIVATIKFTVYTSSELQMRRSSLPATDAALIFVLTIGVIICVFIIFLLIFIIINWAAVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLPTEMPGEDDALSEWNE |
1 | 1vt4I3 | 0.08 | 0.07 | 2.72 | 0.74 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------- |
2 | 6hpdA1 | 0.06 | 0.06 | 2.47 | 0.63 | EigenThreader | | EVITSSERN-------------------VDWIKS----NPKQAQDINYNDATWFDDLSHGHHDGEDNQWRGTVWYRKHFKVFIEFESVRQIADVYINGHLKFGEENIIAVKVNNDRGDHFRENFPNHEHWHPTHVETEIQNEHNKNITLVTQIVDNDGAVVAHSSGQVTNIQNYPYMYKVVSAIKESNK--VIDTYESPLGIRNFDFNK--DSGFWINETWDIRYKAFKDLIVYYREEFAVRQADHWWNKMGKKAYHSGGANWIGRCPTEVTRASGEVDAVRLPKEAFYALKAM |
3 | 5f4eA | 0.19 | 0.12 | 3.85 | 0.49 | FFAS-3D | | -------CDPSVVLALKSLEKDYLPGHLDENAVKDFQELSLNEDAYDEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWAYCPNKCGVMLQTLIW---CKN----CKKEVHACRKSYDCGERNVEVPQMEDMILDCELSEGLTDYSFYRV-WGNNTETLVSKGKEATLTKPGPEDAGSYRCEGSVNSSPATIINFHVTVL-------------------------------------------------------------------------------------------- |
4 | 7jtkA | 0.13 | 0.12 | 4.04 | 0.58 | SPARKS-K | | GDCHPFDSP-GLIVPELKQTILNLRDHHGVQLDA-ADAIQAIDPAERVPVTRQQDQSLDEASAGRAAEPAPVK---------KLRIDLSWTFWEYNLVMYNKDGEEVQSISTREATGA---RAGRPDPYEFKERDVIYLDLPAEVRSMVLLVTNYDEENGFTRVRTVRCRLVDVSNGEA----PLAPPNPERVLADYGVLS------KYEDDKATTQVALMKLDSAFNVFRGAVAAFIGPDTIINQLKAYLEATKKQKAAEAAAAAAAEESGEEITADPKPLNFGGDSLEAIEH |
5 | 4ui9I | 0.08 | 0.04 | 1.51 | 0.73 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------LNILVLGGSSGFIELYAYGMFK---IARVTGIAGTCLALCLSSKSLSVVTEVST--NGASEVSYFQLETNLLYS------FLPEVTRMARKFTHISALLQYISLTCMCEAWEEILMQMDSRLTKFVQEKNTTTSVQDEFMHLLLWG----KASAELQTLLM |
6 | 7abiA | 0.04 | 0.03 | 1.54 | 0.67 | DEthreader | | -------ELDPEEDAPVLDWFDPLRDSNGSTYQRWR------------AQKKR--------------VESHFDWWTRLTYLA--------------------PLSYKDTLALLKYSQ-E--V-IEFMDLYSHLVPVYDVELEKTDAYLDQYLWYEAD-K-------------RRLFPIIVAMKNNVVITNSIRGLASFQY--QMPNDF-SEFIQRVWSWDRG-KLWNLNNYRTDMIALGVGILHTWPTINRAVIFMHSYKMNSSIQLIAILHSMAMKALYVLRERI-------- |
7 | 2pffB | 0.08 | 0.08 | 3.05 | 1.47 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGQGMGMDLYKTSKAAQDVWNRADNHILDIVTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQV |
8 | 6c72A3 | 0.14 | 0.12 | 4.04 | 0.39 | MUSTER | | AELLESD-TTILQKCVDYMALIGVQLPKGHIYAKAMAKSNVEVRGTFDSFVSVGSEADINNL----------RTVVQTATYKHGTFWHSSDGSQVYLV---PENVTGAGVSNLKMLGS---RLGSTSSNCG-----FGIKIIGDS-FTAKWVDTSG------FRLEGLYIRGKDGVSCYFENCNFLDARRALVYCHDVTFKNCTFQQLKPELTWVYLFDIEPNPATTDTVYNVTLI-VFNALASAGAEPTVLVKEQNTPTGSPFLNCRFKGKAT-------------------- |
9 | 1cidA2 | 0.18 | 0.04 | 1.44 | 0.55 | HHsearch | | ------------------------------------------------------------------------------------------------------------VMKVTQ----------PD------SNTLTCEVMGPTPKMRLILKQ--ENQEARV-SRQEKVIQVQ-APEAGVWQCLLSEGEEVKMDSKIQV----------------------------------------------------------------------------------------------- |
10 | 5f4eA | 0.13 | 0.09 | 3.06 | 0.66 | CEthreader | | PGHLDAKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKETFAYCPNKCGVMLQTLIWCK-------NCKKEVHACRKSYDCGERNVEVPQMEDMILDCELNWSEGLTDYSFYRVWGNNTETLVSEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLP------------------------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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