Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCSSSSCCCCCCCCSSSSSSCCCCCCSSSSSSCCCCCHHHHCHHHHHHHHHHHHHCCCCCSSSSSCCCCSSSSSCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCSSSCCCCCSSSSSCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCREGALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFRLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIPTGFADEDINKRFLSDIPSSQILQEEMTWMKEILSNLGSPVVLCHNDLLCKNIIYNEKQGDVQFIDYEYSGYNYLAYDIGNHFNEFAGVSDVDYSLYPDRELQSQWLRAYLEAYKEFKGFGTEVTEKEVEILFIQVNQFALASHFFWGLWALIQAKYSTIEFDFLGYAIVRFNQYFKMKPEVTALKVPE |
1 | 6whpA | 0.24 | 0.18 | 5.66 | 1.17 | DEthreader | | -----------------------------------------------------------------------------------------------------VRHVALSVDASEWRQVFKQKVLAILRRLHSSLTPTNIHLQKVSGALTNAVFFVSFNPQYPHTLLFRVYGP--S-LISRSEELRILHVLSTYGIGPRVFGTFTNGRVEEFFPSRALTAQELRDPIISRGIARRMRELHSVDLRRLGYETPALWICLKEWSEAAEDVISLLGTLEAWVERFSLHRIREEVTIYRNFVESQKGNGVVFAHNDTQYGNLLRLDVLERYIVIDFEYASPNPRGYDIANHFHEWRANYTIPHFPYPTPIQREDFYRSYLSVEVDEEVVGKDVPADKVAALEHEVRIWSPGCSINWALWGLVQAEEQAPEFDYLSYAAERLEMFRDEAKKLGVP---- |
2 | 1nw1A | 0.24 | 0.19 | 5.78 | 1.76 | SPARKS-K | | ----------------------------------------------------------------------------------------------GMKELLSTMDLDT---DANTIPELKERAHMLCARFLKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPNKVLLRVYFNPETE-SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQL--EVPIWKEPDLCEALQRWLKQLTGTVDAEHLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK---RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEANFPENDQMLEFFLNYLREQGNTRE---NELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA--- |
3 | 6whpA | 0.26 | 0.20 | 6.08 | 1.05 | MapAlign | | ------------------------------------------------------------------------------------------------------VRHVALSVDASEWPVFKQKVLAILRRLVPRWSPTNIHLQKVSGALTNAVFFVSFNEQYPHTLLFRVYG---PSLISRSEELRILHVLSTYGIGPRVFGTFTNGRVEEFFPSRALTAQELRDPIISRGIARRMRELHSVLRRLGRATEPALWICLKEWSEAAEDSLTALGTLEAWVERF-SLHRIREEVTIYRNFVESGKGGVVFAHNDTQYGNLLRLDVHCRYIVIDFEYASPNPRGYDIANHFHEWRAHSLIPHFPYPTPIQREDFYRSYLSVVDGRNGEEVDVPADKVAALEHEVRIWSPGCSINWALWGLVQAAGYVPEFDYLSYAAERLEMFRDEAKKLGVPL--- |
4 | 3g15A | 0.33 | 0.24 | 7.18 | 0.75 | CEthreader | | ---------------------------------------------------------------------------------------------------------------EQPEPRTRRRAYLWCKEFLPGLREDEFHISVIRGGLSNMLFQCSLPDTEPRKVLLRLYGAAE----AMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPK-WLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYN-LPLELENLRSLLESTPSPVVFCHNDCQEGNGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMPFFRANIRKYPTKKQQLHFISSYLPAFQNDFELSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFDAYFHQKRKLGV----- |
5 | 1nw1A | 0.25 | 0.19 | 5.96 | 1.46 | MUSTER | | ----------------------------------------------------------------------------------------GMKELLSTMDLDT---------DANTIPELKERAHMLCARFLGTVPLEHLRISRIKGGMSNMLFLCRLSEVYPNKVLLRVYFNPETES-HLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPD-YLCEALQRWLKQLTGTVDAEDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLP---KRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFPENDQMLEFFLNYLREQGNTRENE---LYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA--- |
6 | 6whpA | 0.25 | 0.19 | 5.90 | 2.09 | HHsearch | | ------------------------------------------------------------------------------------------------------VRHVALSVDASEQPVFKQKVLAILRRLVPRWSSTNIHLQKVSGALTNAVFFVSFNPAPPHTLLFRVYGPS---LISRSEELRILHVLSTYGIGPRVFGTFTNGRVEEFFPSRALTAQELRDPIISRGIARRMRELHSVDLRRLGATEPALWICLKEWSEAAEDVISSLTALGTLEAWRFSLHRIREEVTIYRNFVESQGNGVVFAHNDTQYGNLLRLDVECRYIVIDFEYASPNPRGYDIANHFHEWRANYLIPHFPYPTPIQREDFYRSYLSVEVDGRNKRKDVPADKVAALEHEVRIWSPGCSINWALWGLVQAEEQVPEFDYLSYAAERLEMFRDEAKKL-GVPL-- |
7 | 6whpA | 0.25 | 0.19 | 5.90 | 2.33 | FFAS-3D | | ------------------------------------------------------------------------------------------------------VRHVALSVDASRQPVFKQKVLAILRRLHPRWTPTNIHLQKVSGALTNAVFFVSFNPAPNHTLLFRVYGPS---LISRSEELRILHVLSQYGIGPRVFGTFTNGRVEEFFPSRALTAQELRDPIISRGIARRMRELHSVDYEQGRATEPALWICLKEWSEAAEDVISSLTALLEAWVERFSLHRIREEVTIYRNFVESQSGGVVFAHNDTQYGNLLRLDVELPYIVIDFEYASPNPRGYDIANHFHEWRANYHHPTFPYPTPIQREDFYRSYLSVEVDGRNGEEDVPADKVAALEHEVRIWSPGCSINWALWGLVQAEEQVPEFDYLSYAAERLEMFRDEAKKL-GVPL-- |
8 | 3c5iD | 0.24 | 0.17 | 5.25 | 1.03 | EigenThreader | | ----------------------------------------------------------------------------------------------------------------LTDPLYIKKICLEKVPEWNHFTEDNLRVKQILL--TNQLFEVGLKNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPLLNTFN--GGRIEEWLGDPLRIDDLKNPTILIGIANVLGKFHTHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEK--------YNCDIHKYIKESDKFIKFMKVYSNTIVFCHNDLQENNIINT--NKCLRLIDFEYSGFNFLATDIANFFIETSVSSYPFFKKKYIS---YENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQSYNEFDFFLYAEQRLKMYDDQKEYLISNNIIK |
9 | 1nw1A | 0.25 | 0.18 | 5.61 | 1.96 | CNFpred | | -------------------------------------------------------------------------------------------------------------------PELKERAHMLCARFL-TVPLEHLRISRIKGGMSNMLFLCRLSE-EPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWK-EPDYLCEALQRWLKQLTGTVHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK---RLVLIDFEYASYNYRAFDFANHFIEWTIDYKIQTENFPENDQMLEFFLNYLREQGNTR----NELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNL---- |
10 | 2qg7D | 0.30 | 0.21 | 6.44 | 1.17 | DEthreader | | ---------------------------------------------------------------------------------------------------------LKYVSNVFENKTLYIYCKYVMLHYGKVNEVDSLEFQIINGG-TNILIKVKDMSK-QAKYLIRLYGPK-T-D-NREREKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNELYLQPSFLWNTIWKYFHLLERKICSFDKANILKL-I-DFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTV-GDSISFIDFEYSCPMERAYDIANHFNE-YAGFNCDWDLTPSKEEEYHFIMHYLG----------TDDEELINQLIREIQPFYICSHINWGLWSLLQGMHSSD-FDFINYGMTRLTASCLIFRSK--V---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|