Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHCCCCCCSSSSSSSCCCCCHHHHHHHSSCCCCCCCSSSSSSSSCCSSCCCCCHHHHHHHHHHHHHHCCCSCSSSCCCCCCCCCCCCSSSSSSSSSCCCCCCCCCCCSSSSSSSSCCCCCSSSSSSSSSCCCCSSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSSSSCCCCSSSCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCSSSSSCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCCSSC MEIGSAGPAGAQPLLMVPRRPGYGTMGKPIKLLHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA |
1 | 4f1nA | 0.29 | 0.27 | 8.30 | 1.33 | DEthreader | | ------TKGTKVDILTNISMPK---NSAYQFMRVPSR-ILDAPVVQF---KESTFEYKSKNWNMGHQFINLLGSNHSLSIENNKLLIKLPILVLGSDVTHYP--EKDQNSIASLVGSYDDKFTQFPGDYMLQDGPEEIITNVGSLMLNRLKIYQKHNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGNKYDPPVTCIATVKRNQVRFIPIQENVAQSMG-NVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFE----LNMAQA---TVSKNVL--LPQVNDNIKSVMYYI |
2 | 4f1nA3 | 0.29 | 0.27 | 8.15 | 3.42 | SPARKS-K | | ------------DTHAIYKVENRHDYGTKGTKVDIPSRILDAPVVQFKESTFEDKSYGTKHEEKGNWNMKG---HHSLSIENNKLLINLPILVLGSDVTHYPEK--DQNSIASLVGSYDDKFTQFPGDYMLQDPGEEIITNVGSLMLNRLKIYQKHNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAG-------FELNMAQATVSKNVLL--PQVNDNIKSVMYYI |
3 | 4ei1A | 0.81 | 0.73 | 20.53 | 1.71 | MapAlign | | --------TIKLQAFEMDTDPYVREFGIMVKMTDVTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQFHLGGVNNILLPQGRPPVFQQPVIFLGADVT------HPKPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHL---------------------HQALAKAVQVHQDTLRTMYFA |
4 | 4ei1A3 | 0.72 | 0.67 | 18.97 | 1.10 | CEthreader | | FCKYAQGADSVEPMFRHLKNTYAGLQLVVVILPGKTPVYAEVKRVGDTVLGMATQCPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPK------PSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHL---------------------HQALAKAVQVHQDTLRTMYFA |
5 | 4ei1A | 0.73 | 0.67 | 18.96 | 2.68 | MUSTER | | FRHLKNTYAGLQLVVVILPGKT-PVYAEVKRVGDTVL--MATQCVQMKNVQR--TTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHP------KPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLHQA---------------------LAKAVQVHQDTLRTMYFA |
6 | 4ei1A | 0.78 | 0.72 | 20.40 | 3.60 | HHsearch | | LEVCNIVAGRQEEIADFNTDPYVREFGIMDEMTDVTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQFKLGGVNNILLPQGRPPVFQQPVIFLGADVTHP------KPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLHQAL---------------------AKAVQVHQDTLRTMYFA |
7 | 4f1nA3 | 0.28 | 0.26 | 7.93 | 2.93 | FFAS-3D | | -----------DTHAIYKVENRHDGTKVDILRVPSRILDAPVVQFKESTFEY-KDKSYGTKHEESKGNWNMKGHHSLSIENLIDKESNLPILVLGSDVTHYPE--KDQNSIASLVGSYDDKFTQFPGDYMLQDPGEEIITNVGSLMLNRLKIYQKHNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQATVS---------KNVLLPQVNDNIKSVMYYI |
8 | 4ei1A | 0.68 | 0.62 | 17.69 | 1.78 | EigenThreader | | LRYPHLQEHLEVCNIVAGQRCIKKLFNTDDEMTDVTGRVLQPPSILYGGRNKQFHTGIEIKVILPGKTVQMGGVNNILLPQGRPPVFQQPVIFLGADVTHP------KPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQHTRLFCT---DKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLHQALAKAVQVHQDTLRTMYFA--------------------- |
9 | 4z4hA | 0.77 | 0.71 | 20.10 | 3.32 | CNFpred | | -----------QLVVVILPG----KTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKE--------------GRDHQALAKAVQVHQDTLRTMYFA |
10 | 4ei1A | 0.79 | 0.71 | 20.00 | 1.33 | DEthreader | | ------TSGRTIKLQANFSMRDF----KDEMTDVT-GRVLQPPSILYGGRNKAIATPVQGVWDMNKQFGNVGGVNNILLPQGRPPVFQQPVIFLGADVTHP------KPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYH-L--------------------HQALAKAVQVHQDTLRTMYFA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|