Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCSSSSSCCCCCSSSSSSSCCSSCHHHCSSSSCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCSSCCCHHHHHHHHHCCHHHHHCCSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCSSSSCCCCCCCCHHHHHHHHHHHHCCCCCCSSSSC CSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSRMEEILHEHSYIAEDYVEELHKWRCPDYYENNVHKMQLPFSSKLLGSTLTSEEKQERRQQQLRRLQELNARRREEKLQLDQERLDRLLYVQELLEDGQMDQFHKALIELNMDSPEELQSYIQKLSIAVEQAKQKILQAEVNLEVDVVDSKPETPDLEQLEPSLEDVESMNDFDPLFSEETPGVEKPVTTVQPVFNLAAYHQLFVGTERIRAPEIIFQPSLIGEEQAGIAETLQYILDRYPKDIQEMLVQNVFLTGGNTMYPGMKARMEKELLEMRPFRSSFQVQL |
1 | 6fhsJ | 0.31 | 0.18 | 5.52 | 0.83 | DEthreader | | QTGLVVSSSYSATHVIPVYNRKALLSQAIRLNWGGWHMAEYMLKLLKLKYYGFPGKLNSSQTEHMVRDFCYVSLDYDRELAGYLDWTGLEDRERIVQYP----------------------------D--WS-KSL----------------------------------------------------------P--RP------------------------------------------------FDP-S-S-QAETHRVHLNVERIRVPEVLFQPAIAGVDQAGLVEIAGDILQRLPSQDAPAFLRDVFLTGGNTLFQNFDERLRQGLMALLPVGAPLRVRR |
2 | 6gejR1 | 0.23 | 0.14 | 4.26 | 1.21 | SPARKS-K | | DFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRHYNM--MDETILVNNIKEQCLFVSPVSYFDSFKT-----KDKHALEYVLP-----DFQTS-------------------------------------------------------------------------------------------FLGYVRNPRKENVPLPEDAQ----------------------------------------IITLTDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRLAAELQRQLPTDWTCHVSV |
3 | 1u2vA2 | 0.26 | 0.14 | 4.38 | 1.08 | MapAlign | | LTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPEQS-LETAKAVKERYSYVCPDLVKEFNKY--DTDGSKWIKQYTGINAI---------------------------------------------------------------------------------------------------------------------------------------------------------SKKEFSIDVGYERFLGPEIFFHPEFANPDFQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVPKPIDVQVIT |
4 | 3eksA2 | 0.29 | 0.15 | 4.68 | 0.98 | CEthreader | | TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL-----------------------------------------------------------------------------------------------------------------------------------------------------------------KDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII- |
5 | 6gejR1 | 0.21 | 0.12 | 3.95 | 1.07 | MUSTER | | DFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRHYNMMD--ETILVNNIKEQCLFVSPSYFDSFKTK------DKHALEYVLPDFQTSFLGYVR----------------------------------------------------------------------------------------------------------------------------------------NPRKENVPLPEDAQIITLTDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRLAAELQRQLPTDWTCHVSV |
6 | 4am6A2 | 0.12 | 0.09 | 3.06 | 2.04 | HHsearch | | TSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSFPLQDSKHGWLLAERLKKNFTTFQDADVAVLYNFMNR-SPNQPTEKYEFKLFDEVM---LAPLA------------------------------LF------------FPQIFK----LIRTSSH------------KNS-SL--------------------EFQLPESRD----------------LFTNELNDWNSLS--QFESKEGNLYCDLNDDLKILNRILDGNTLKENFAPLEKAIVQSIANADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFP |
7 | 6gejR1 | 0.21 | 0.12 | 3.95 | 1.77 | FFAS-3D | | DFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRHYNMMD--ETILVNNIKEQCLFVSPVSYFDSFK-----TKDKHALEYVLPDFQT----------------------------------------------------------------------------------------------------------------------------------------SFLGYVRNPRKENVPLPEDAQIITLTDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRLAAELQRQLPTDWTCHVS- |
8 | 6gejR1 | 0.22 | 0.12 | 3.94 | 1.47 | EigenThreader | | DFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRHYNM--MDETILVNNIKEQCLFVSPVSYFDSFKT-----KDKHALEYVLPDFQTSF-----------------------------------------------------------------------------------------------------------------------------------------LGPRKENVPLPED---AQIITLTDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRLAAELQRQLPTDWTCHVSV |
9 | 4pl7A | 0.29 | 0.16 | 4.76 | 1.28 | CNFpred | | TTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYTFSTSAEREIVRDIKEKLCYVALDFDQELQTSS---QSSSIEKSYELPD--------------------------------------------------------------------------------------------------------------------------------------------------------------GQVITIGNERFRAPEALFHPSVLGLEASGIDQTTYNSIMKCDVDVRKELYSNIVMSGGTTMFPGIAERMQKELTALAPSSMKVKISA |
10 | 6gejR | 0.21 | 0.12 | 3.86 | 0.83 | DEthreader | | DFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRH-YNMMD-ETILVNNIKEQCLFVSPVYFDSFKTK--D-K---HALEYVLP--DFQTS---------------R--NP--R--------------------------------------------------------------------------------------------------------KEN--VP--LPED------------AQIITLTDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRLAAELQRQLPTDWTCHVSV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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