Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCSSSCCCSSSSSCCSSSSSSSSSSCCCCCHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCSCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHSSSCCCCCCCCCCCHHHHHHHCCCCSSSCCCCSSSSSCCCSSSSSSCCCCCCSSSSSSCCCCCSSSSSCCCCCCCCCSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCCCCCSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCSSSSSSSCCCCCCCSSSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCCSSSSSCCCCCCCCCCSSSSSCCCCCSSSSSSSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCSSSSSCCCCCCCSSSSSSSCCCCCSSSSSSCCCSSSSSCCCCCC MSRSGAAAEKADSRQRPQMKVNEYKENQNIAYVSLRPAQTTVLIKTAKVYLAPFSLSNYQLDQLMCPKSLSEKNSNNEVACKKTKIKKTCRRIIPPKMKNTSSKAESTLQNSSSAVHTESNKLQPKRTADAMNLSVDVESSQDGDSDEDTTPSLDFSGLSPYERKRLKNISENADFFASLQLSESAARLREMIEKRQPPKSKRKKPKRENGIGCRRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLHTWAGMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDLTQQPKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFLAEDASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTHIYDARRLNSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFDSSCISSKIPLLTTIRHNTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRVEIFHETGKRVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVFMNEKSC |
1 | 5mzhA | 0.15 | 0.09 | 3.14 | 2.15 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------------------------KLRKFLLRYERVMKQKPIDLLDLTPDVD-----------VEVLLSQIIRQEPLENRRPALRQLIHRLIDKMLE---------------------------------FTLFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNT-------FTGEEVFTLEGHKNVVYAIAFNN-----------------PYGD--KIVTGSFDKTCKLWDAYTGQL---YYTLKGHQTEIVCLSFNPQ-STIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTG-GDLIVTGSFDHDSRLWDVRTGQ--CVHVLSGHRGEVSSTQFNYAGT-LVVSGSIDCSRLWDVRSGR-----CLSVKQGHTDEVLDVAFDA-AGTKMVSASADGSARLYHTLTGV---CQHTLVGHEGE------ISKVAFNPQGTR-LITASSD--KTCRLWDCTGECLQVLEG-HTDEI-FSCAFNYEGDFIITGSKDNTCRIWKALT-- |
2 | 2ymuA | 0.15 | 0.13 | 4.50 | 1.64 | MUSTER | | MGVKERNRLEAHSSSVRGVAFS--PDGQTIASASDGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQL-------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI--NRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ--------------------------LLQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNRNGQ----HLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN------RNGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNG-----QLLQTLT-----GHSSSVRGVAFSPDGQ---TIASASDDKTVKLWNRNGQLLQTLTG-HSSS-VWGVAFSPDGQTIASASSDKTVKLWN----- |
3 | 5oqlA | 0.13 | 0.12 | 4.01 | 1.80 | FFAS-3D | | -------------------KFSNLLGTVYRGNLLFSPDGTHLFSPRVTVF----NLVENKSYTFP-------FAHRKNISR---------IGLTPQGNLLLSIDEDGQAILTNVPRRVVLYHFSFKSPVTALAFSPSGRHFVVLKRKPSTPDTNEDGDLEFAPFVRHHTHMQHFDDVRHLEWSSDSRFFLSASKDLTASLDTEEGFVPTVLSGHRQGVVGAYFSKDQETI-------------YTVSKDGAVFEWKYWRIVNKHFFMQNLRCAAYHAESNLLVAGFSNGIFGLYEMPDFNLIH----TLSISQNEIDFVTINKSGE-WLAFGASKLGQLLVWEWQSESY---ILKQQGHFDAMNSLVYSP-DGQRIVTAADDGKIKVWDVESGFCIVTFTEHTSGVTACEF-AKKGSVLFTASLDGSVRAWDLIRYR-NFRTFTAPERLSFTCMAVDPSGEVIAAGSIDSDIHIWSV-----QTGQLLDRLSGHEGPVSSLAFAP-DGSVLVSGSWDRTARIWSIFSRTQTSEPL---------QLQSDVLDVAFRPDSK---QIAISTLDGQLTFWSSEAQQVSGVDGRGTKNFNTI-RYSMDGTCLLAGGNSKYICLYSTTT-- |
4 | 5mzhA | 0.15 | 0.08 | 2.85 | 5.12 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------RPALRQLIHRLIDKM--FTLFKVLRAHI-----------------------------------------------------LPLTNCAFNKSGDRFITGSYDRTCKVWNTFTG-------EEVFTLEGHK------------------NVVYAIAFNNP-YGDKIVTGSFDKTCKLWDAYTG---QLYYTLKGHQTEIVCLSFNPQ-STIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNT-GGDLIVTGSFDHDSRLWDVRT--GQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRS-----GRCLSVKQGHTDEVLDVAFDAA-GTKMVSASADGSARLYHTLTG---VCQHTLVGHE------GEISKVAFNPQGTRLITASSD---KTCRLWDCDGECLQVLEGHT-DEIFSCAFNY-EGDFIITGSKDNTCRIWKALT-- |
5 | 3dm0A | 0.14 | 0.08 | 2.74 | 0.83 | DEthreader | | --HDRFG-----------------LYPFTWDAVR-----------YNGKLIAYPIAV-PWA-----LSAGI---NAASPNKEAKEFLENYLTDEG-----------------------------------------------------------------------------------------------------------------------------------------------SGRQTAAAAATNALVLK--------------G-T-------------------------------------MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDKAGVAQRRLTGHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRTIKLWNT--LGECKYTISEGHRDWVSCVRFSPNTQPTIVSASWDTVKVWNLSNC-----KLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEG----KKLYSLEAN------SVIHALCFSPNRY-WLCAATE--HGIKIWDLES-KSIVEDLKVDLVIYCTSLNWSADGSTLFSGYTDGVIRVWG-I--- |
6 | 3jctx | 0.13 | 0.09 | 3.07 | 2.05 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------STLIPPPSKKQKKEAQLPREVAIIPKDLPNVSIKFQALDTGDNALRVPGAISE------------------------KQLEELLNQLNGTSVPTIKASDPYSSLIKPQITLLYTPRA-VFKVKPVTRSSSAIA-----GHGSTILCSAFAPHSSRMVTGAGDNTARIWDCDTQ-------TPMHTLKGHYNW------------------VLCVSWSPDGEV--IATGSMDNTIRLWDPKSGQCLGDA--LRGHSKWITSLSWEPISKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRVWDINSQGR-CINILKSHAHWVNHLSLSTDYEEMMVTASDDYMFLWNPL----KSTKPIARMTGHQKLVNHVAFSP-DGRYIVSASFDNSIKLWDGRDGK---FISTFRGHVA------SVYQVAWSSDCR-LLVSCSKD--TTLKVWDVTRKLSVDLPG-HKDEV-YTVDWSVDGKRVCSGGKDKMVRLWTH---- |
7 | 5teeA | 0.07 | 0.07 | 2.91 | 0.37 | MapAlign | | AVPGGLFGFAARTSVFLVRVGPGAGESPGTPPFRVIGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRVKDLIVSGDEKGVVFCYWFNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIIDISKKGEVIHRLAWCPLPGEDCLGC---YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWLTLHWPSNQPTQLVSSCFGGELLQWDLTQSWRRKYTLFNHSRIVFNLCPLQTEDDKQLLLSTSMDRDVKCWDECSWTLPLGGFAYSLAFSSVD-IGSLAIGVGDGMIRVWNTLSIKNNYDVKNFWGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISTYHKKTVYTLAWGPRPSLALYSCGGEGIVLQHNPWKLSGEAFDINTNKLPVHTEISWKAD-GKIMALGNEGSIEIFQI-----PNLKLICTIQQHHKLVNTISWHHELSYLMASGSNNAVIYVHNLKTVITITEPYRTLSGHT-----AKITSVAWSPHHDGRLVSASYD--GTAQVWDALEEPLCNFRG-HQGRLLCV-AWSPLPDCIYSGADDFCVHKWLTSMQD |
8 | 5nrlH | 0.11 | 0.08 | 2.70 | 0.23 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------QNESTADILKQLPHERLQAVLEKIPEEDLEVRRLLSILKKPEVVENEDVQQRRIRLAEILMVDEIDLENINDFFTPATSELIFARRFLINYSLER----------------SRKRLQKEMERHQKFNTRQELLSRRTELQRMANLELAGSQLVSTKPISAVSLSTDDM--VVATGSWAGDLQVLNSQTL--QPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYGGLRLLGDLVGHERRISDVKYHP-SGKFIGSASHDMTWRLWDASTHQELLLQEG--HDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSK-----VMTLAGHSKPIYTVAWSP-NGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRN-------IVTQVRFSKDGGKKLVSCGYD--NLINVYSSDTWLKMGSLAGHTDKII-SLDISNNSHFLVSGGWDRSIKLWN----- |
9 | 5i2tA | 0.11 | 0.10 | 3.52 | 1.51 | MUSTER | | ---------------------------------DFKF--SNLLGTVYRQGNITFSDDGKQLLSPVGNRSVFDLINNKSFFEYEHRKNIAAIDLNKQGTLLISIDEDGRAILVNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFKTPDVNKDRQFAPFVRHRV--HAGHFQDITSLTWSQDSRFILTTSKDLS-VDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIFTSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTL-------IQQLSMGQNPVNTVSVNQTGEQQGHFDSTNSLAYSPDGS--RVVTASEDGKIKVWDITSG---FCLATFEEHTSSVTAVQFAK-RGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTRIQFNCLAVDP-SGEVVCAGSLDNDIHVWSVQTGQLL--DALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVE----PIE-VYSDVLALSMRP-DGKEVAVSTLKGQISIFNIEDAKQ---VGNIDCRKDIISKF--FTTIHYSFDGM---AIVAGGNNNSICLYDPNEVLLKRFIVSRNEVRVTSVQFSPTANAFAAASTE-GLLIYSTN--- |
10 | 5a1uD | 0.13 | 0.08 | 2.65 | 0.73 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPLRLD--IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQ-------TLVKTFEVCDLPVRAAKFVARKNWVVTSDYIRCIAVHPTQPF--ILTSSDDMLIKLWDWDKKW--SCSQVFEGHTHYVMQIVINPD-NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS-GGDYLISGADDRLVKIWDYQNKTCVQ--TLEGHAQNVSCASFHPEL-PIIITGSEDGVRIWHSST-----YRLESTLNYGMERVWCVASLR-GSNNVALGYDEGSIIVKLGREEPAMMDAGKIIKTEIKDGERLYPQTIQHNPNG-RFVVVCG-D--GEYIIYTMALRN-----K-SFGSAQEF-AWAHDSSEYAIRESNSIVKIFKNFKEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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