Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCSSSSSSSCCCCCHHHHCCCCCSSSSSSSSCCSSCCCCHHHHHHHHHHHCCCCSSSSSSSCCCCSSSSSSSCCCCCCCCCCCSSSSSSSCCCCCCCCCSSSSSSCCCCCHHHHCCCCCCCCSSSSCCCCCCCCHHHHHHHHHHCCCCSSSSSSCCCCCSSSSSSSSSCCCCCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMAGTPITPLKDGFTEVQLSSVNPPSLSPPGTTGIEQSLTGLSISSTPPAVSSVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLMPLPAGLPNLPNLNLNLPAPHIMPGVGLPELVNPGLPPLPSMPPRNLPGIAPLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAPSDPATTTAKADAASSLTVDVTPPTAKAPTTVEDRVGDSTPVSEKPVSAAVDANASESP |
1 | 6x6aA | 0.08 | 0.08 | 2.97 | 0.87 | EigenThreader | | FGITSYDFHSESGLFLFQFHCRDGGKNGF--MVSPMKPLEI---KTQCSGP---RVIQEEFESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIA-LKLAEFQTDSQGKIVSTQEKELVQPFSSLFPKVE---YIAR--AGWTR-----------DGKYAWAMFLD-RPQQWLLVLLPPAPRNVQPNVWINVHDIFYPFPQSEGEDELLKSQGYDWSEPFSPGEDEFKCPIKEEIALTSGEWEVLARHGSKFQGTKDTPLEHEAAGEIVRLTTPGFVSTPPPDDDPLHKAASCPPDYVPPRSDVPHALQPGKKGGPQVQLVNNSFKGIKYLRLNTLASLGYGRGSCQRGLRFEGALKNQMGQVPQVFKPVTVWMAYDTGYTERYMDVPENNQHGYEAGSVALHVEKLPNEPNRLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRC |
2 | 4kfvA | 0.69 | 0.30 | 8.62 | 0.84 | CEthreader | | ------------GGEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPAALAGLRPYTDYIVGSDQILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPSSQYK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 4l8nA | 0.08 | 0.06 | 2.51 | 1.11 | MapAlign | | GFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKK-YDVIEEINGVPVTVSVDEIPQLLNPAGRNDVLLTISNLS-SPSKQVLVKKETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSCIENELTKKGLTVPDLLIQTFYFKFPFLNYAAAEAEAEYLLQFGIRIIDQKDGRVLECEANELLEDSYCQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDIIEKIGRHKDHSAEEFSSAYKRFITNTQYRDPKTFTDANGFKYCFWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEI---------------------------------------------------------------------------------------------------- |
4 | 4kfvA | 0.69 | 0.30 | 8.62 | 1.36 | FFAS-3D | | ------------GGEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPAALAGLRPYTDYIVGSDQILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPSSQYK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 4kfvA | 0.69 | 0.30 | 8.62 | 1.60 | SPARKS-K | | ------------GGEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPAALAGLRPYTDYIVGSDQILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPSSQYK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5gmiA | 0.99 | 0.46 | 12.77 | 3.00 | CNFpred | | SGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELREASVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 5n2eA | 0.06 | 0.04 | 1.71 | 0.67 | DEthreader | | ------------------------------------------FESH--------Y-LKSRCETVF--------------------NGC--DIPRSYLFLDIECHFDINPISHTSYCYIDLSG--K----RL--LFTLINEEMLTEEIAVCLRIQ-SLM-EMDYER--------ELVLC---------VLLRIA-QLL--DLDSAFSCMDTDAVDED----TLPNYKLSFGLYLYYVETKAGTYGPLLLETKTILVRSETKQKFPYLSLVGLYPPPRYITVH-CE-PR-LPNLISEIAIF---------PRLR-LAK-NTIGRRLYESVLNGFRSVYGDTDSVFLERINNRVLFN---F-IEFEAVY-LMQSKKKYTINKGTS-ETRRD------------------------CILSLTDLRSFDPW-------------LCFFMFSKPT--- |
8 | 5e55A | 0.08 | 0.05 | 1.85 | 1.13 | MapAlign | | PPEDVKVEHISSTTSQLSWRPG-------PDNNSPIQIFTIQTRTPAVATVPEILATVVGLSPWVEYEFRVVAGNIGEPSPSLLRTKAS--VPNVAPGNINGGGG-SRSELVITWEAIPE-ELQN---GEGFGYIVMFRPVGTTAWMKIYRNESIMPLSPFEVKVGVYNNGSLSVTIVYSGEDEPQLAP----------------------------------------------------------RGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNVTTKNI-----TGLRANTIYFASVRAYNTAGTGPSSLPVNVTT------------------------------------------------------------------------------------------------------------ |
9 | 3rleA | 1.00 | 0.44 | 12.39 | 1.09 | MUSTER | | ------VEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVK-LIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-NESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3rleA | 1.00 | 0.44 | 12.39 | 2.50 | HHsearch | | ------VEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVK-LIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-NESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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