Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MDTRSGSQCSVTPEAILNNEKLVLPPRISRVNGWSLPLHYFQVVTWAVFVGLSSATFGIFIPFLPHAWKYIAYVVTGGIFSFHLVVHLIASCIDPADSNVRLMKNYSQPMPLFDRSKHAHVIQNQFCHLCKVTVNKKTKHCISCNKCVSGFDHHCKWINNCVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQYLVNPGVLRTDPRYEDVKNMNTWLLFLPLFPVQVQTLIVVIIGMLVLLLDFLGLVHLGQLLIFHIYLKAKKMTTFEYLINNRKEESSKHQAVRKDPYVQMDKGVLQQGAGALGSSAQGVKAKSSLLIHKHLCHFCTSVNQDGDSTAREGDEDPCPSALGAKARNSRLICRRLCQFSTRVHPDGGSMAQEADDAPSISTLGLQQETTEPMKTDSAESED |
1 | 6bmlA | 0.17 | 0.10 | 3.29 | 0.83 | DEthreader | | T---WR----------------------------RVVGWVPVLFITFVVVWSYYAYVVELCVTIENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKEYEEFSQEQQELSTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNE--L------------------------TD-T-RAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRAP-T-------------------------------------------F-YGP--DG-N---------GFSLGASKNWRQVFG------------------------------------------DEK--KY--LPIF-- |
2 | 6bmlA | 0.19 | 0.13 | 4.07 | 2.27 | SPARKS-K | | ----------------------TLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEEKERYEKEFSQERQQEIYTTSAIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNE----------------------------LTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIE---------------SFRAPTFSYGPD--------------------------------------GNGFSLG-ASKNWRQVFGDEKKYWLLPIFSS-------LGDGCSFPTRL---------------------------- |
3 | 6bmlA | 0.16 | 0.10 | 3.24 | 1.63 | MapAlign | | -----------------------------WRCCQRVVGWVPVLFITFVVVWSYYAYVVELCFTIENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPFYLSNSEKERYERALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFW----------------------------TNELTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESNGFSLGASKNWRQVFGDEKKYWLLPIFSSLGDGCSFPTRL----------------------------------------------------------------------------------------------------- |
4 | 6bmsA | 0.15 | 0.10 | 3.33 | 1.49 | CEthreader | | ------------------------------RCCQRIFSWIPVIIISSVVLWSYYAYVFELCFVTNNLERVTYLLIFHVCFIMFCWTYWKAIFTPPSTPTKKFHLSLVDIAKKLPIFTRAQSGAIRFCDRCQVIKPDRCHHCSVCETCVLKMDHHSPWVNNCVGFSNYKFFLLFLSYSMIYCVFIASTVFQYFLKFWVGDLAK--------------------------------FHVLFLLFVALMFFVSLMFLFGYHCWLVAKNRSTLEAFSPPV-----------------------------------------------------FQNGPDRNGFNVGLSKN-LRQVFGEHKKLWFIPVFTSQGDGHYFPLRTLRESE------------------------------ |
5 | 6bmlA | 0.17 | 0.11 | 3.68 | 1.44 | MUSTER | | ----------------------TLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSLRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTN----------------------------ELTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTF--------SYGPDGNGFSLGASKNWRQVFGDEKKYWLLPIFSSLGDGCSFPTRL--------------------------------------------------------------------------------- |
6 | 6bmlA | 0.19 | 0.13 | 4.07 | 7.11 | HHsearch | | ----------------------TLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERSQEIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNEL--T--------------------------DTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTFSY-----------------------------------------------------GPDGNGFSLGASKN-WRQVFGDEKKYWLLPIFSSL-------GDGCSFPTRL---------------------------- |
7 | 6bmlA | 0.20 | 0.13 | 4.12 | 1.98 | FFAS-3D | | ----------------------------QRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSERQQEILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNELTD----------------------------TRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTFSYGPD--------GNGFSLGASKNWRQVFGDEKKYWLL-------------------------------PIFSSLG-------------------------------D--------GCS----FPTRL------- |
8 | 6bmlA | 0.16 | 0.10 | 3.25 | 0.98 | EigenThreader | | ---------------------------TLWRCCQRVVGWVPVLFITFVVVWSYYAYVVG---NEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPILRRAARALPIYTTSASKTIR------YCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNELTD-----------------------------TRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRT-------------------------------------------------------------TIESFRAPTFSYGGNGFSLGASKNWRQVFGDEKKYWLLPIFSSLGDGCSF-----PTRL------------------------ |
9 | 6bmnA | 0.17 | 0.10 | 3.27 | 1.79 | CNFpred | | --------------------------------------VPVLFITFVVVWSYYAYVVELCVFTIENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSEKERYEKEFSQERQQ-KTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWT-------------------------------TDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRA-----------------------------------------------------PTFSYGPDGNGFSLGCSK-NWRQVFGDEKKYWLLPIFSS---------------------------------------------- |
10 | 6bmsA | 0.17 | 0.10 | 3.34 | 0.83 | DEthreader | | ----R-------------------------------RISWIVIIISSVVLWSYYAYVFELCFVTNNLERVTYLLIFHVCFIMFCWTYWKAIFTPPSTPTKKFHLSYTDKERYRPEVQKQLVAAIRFCDRCQVIKPDRCHHCSVCETCVLKMDHHSPWVNNCVGFSNYKFFLLFLSYSMIYCVFIASTVFQYFLKFWVGD--L---------------------------A--KFHV-LFLLFVALMFFVSLMFLFGYHCWLVAKNRSTLEAFSP--P-------------------------------------------VF-NGP-DR-N---------GFN-VGLSKRQVSQGDYFPLRTL-RE-S-------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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