>Q9H8T0 (292 residues) MNPFWSMSTSSVRKRSEGEEKTLTGDVKTSPPRTAPKKQLPSIPKNALPITKPTSPAPAA QSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDG VFKFTVYIPDNYPDGDCPRLVFDIPVFHPLVDPTSGELDVKRAFAKWRRNHNHIWQVLMY ARRVFYKIDTASPLNPEAAVLYEKDIQLFKSKVVDSVKVCTARLFDQPKIEDPYAISFSP WNPSVHDEAREKMLTQKKPEEQHNKSVHVAGLSWVKPGSVQPFSKEEKTVAT |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MNPFWSMSTSSVRKRSEGEEKTLTGDVKTSPPRTAPKKQLPSIPKNALPITKPTSPAPAAQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDIPVFHPLVDPTSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTASPLNPEAAVLYEKDIQLFKSKVVDSVKVCTARLFDQPKIEDPYAISFSPWNPSVHDEAREKMLTQKKPEEQHNKSVHVAGLSWVKPGSVQPFSKEEKTVAT |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCSSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSCCCCCSSCCCCCCCCCC |
Confidence | 9976667766677788877777888777888776644567887554566677778764335677654444427999999999999996899987998678886279999958998878818999999499999999986898068768871799995611230456595311199999999999629999995229999999976999999999999999998026888899741322678878889999998603653113688877654212468842000258888899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MNPFWSMSTSSVRKRSEGEEKTLTGDVKTSPPRTAPKKQLPSIPKNALPITKPTSPAPAAQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDIPVFHPLVDPTSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTASPLNPEAAVLYEKDIQLFKSKVVDSVKVCTARLFDQPKIEDPYAISFSPWNPSVHDEAREKMLTQKKPEEQHNKSVHVAGLSWVKPGSVQPFSKEEKTVAT |
Prediction | 7432141345544644656654454645645655446542452466445345534554455545444553443124320251045047431520101036610230201020370203402020303027601736103020314100000026414101430375032423202100200220054033720004300510372274045203510540165125536363622040451456225512551356545555666534120001034741411225755368 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCSSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSCCCCCSSCCCCCCCCCC MNPFWSMSTSSVRKRSEGEEKTLTGDVKTSPPRTAPKKQLPSIPKNALPITKPTSPAPAAQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDIPVFHPLVDPTSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTASPLNPEAAVLYEKDIQLFKSKVVDSVKVCTARLFDQPKIEDPYAISFSPWNPSVHDEAREKMLTQKKPEEQHNKSVHVAGLSWVKPGSVQPFSKEEKTVAT | |||||||||||||||||||
1 | 2ediA | 0.20 | 0.11 | 3.60 | 0.83 | DEthreader | -------------------------------------------------------------SSGSSGSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYN-MVPPKVKCLTKIWHPNITE-TGEICL-SLLTGWA-PTRTLKDVVWGLNSLFTDLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR--S--------------GPS-------------------------------------------------- | |||||||||||||
2 | 1ylaA | 0.15 | 0.10 | 3.36 | 1.91 | SPARKS-K | --------------------------------------------------------------------GSMANIAVQRIKREFKEVLKTSKNQIKVDLVDENFTELRGEIAGPPTPYEGGRYQLEIKIPETYPFN-PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMT-LRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG----------------APVSSPEYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELLLS--------- | |||||||||||||
3 | 1ylaA | 0.16 | 0.11 | 3.52 | 1.00 | MapAlign | ---------------------------------------------------------------------SMANIAVQRIKREFKEVLKSEENQIKVDLVDENFTELRGEIAGPDTPYEGGRYQLEIKIPETYPF-NPPKVRFITKIWHPNISSVTGAICL--DILKWAA-AMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHYAGA----------------PVSSPEYTKKIENLCA------MGFDRNAVIVALSSKSWDVETATELL------ | |||||||||||||
4 | 1ylaA | 0.15 | 0.10 | 3.36 | 0.64 | CEthreader | --------------------------------------------------------------------GSMANIAVQRIKREFKEVLKSEETQIKVDLVDENFTELRGEIAGPDTPYEGGRYQLEIKIPETYPF-NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAA-MTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEY-TKKIENLCAMGFDRNAVIVALSSKSWDVETATELLLS------------------------ | |||||||||||||
5 | 1ylaA | 0.18 | 0.12 | 3.80 | 1.33 | MUSTER | ----------------------------------------------------------------GSMA----NIAVQRIKREFKEVLKSEENQIKVDLVDENFTELRGEIAGPPTPYEGGRYQLEIKIPETYPF-NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMT-LRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG-----APVSS-----------PEYTKKIENLCAMGFDRNA------IVALSWDVETATLLLS-------- | |||||||||||||
6 | 5knlC | 0.24 | 0.13 | 3.96 | 1.86 | HHsearch | ---------------------------------------------------------------------MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDKSIFEWEVMIIGPETLYEGGFFHATLSFPQDYPLM-PPKMKFTTEIWHPNVHP-NGEVCISILHERWLPVH-SPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMILEHH---------------------------------------------------------------- | |||||||||||||
7 | 2pwqA | 0.19 | 0.09 | 2.99 | 2.08 | FFAS-3D | -------------------------------------------------------------------------KELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPETPYEGGHFTLAITIPNDYP-YNPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALT-IRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKT------------------------------------------------------------------------- | |||||||||||||
8 | 4r8pL | 0.15 | 0.10 | 3.47 | 1.03 | EigenThreader | ----------------KTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNECLHRFCADCIITALRSNKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNSPYQGGVFFLTIHFPTDYPFK-PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTI--SKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY-----AM----------------------------------------------------------------- | |||||||||||||
9 | 1ayzA | 0.24 | 0.12 | 3.85 | 1.73 | CNFpred | ------------------------------------------------------------------------TPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPATPYEDGTFRLLLEFDEEYPN-KPPHVKFLSEMFHPNVYA-NGEICLDILQNRWTPT-YDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMD------------------------------------------------------------------ | |||||||||||||
10 | 5knlC | 0.23 | 0.12 | 3.86 | 0.83 | DEthreader | --------------------------------------------M-P------------------------SSASEQLLRKQLKEIQKNPPQGFSVGLVDKSIFEWEVMIIGPEDLYEGGFFHATLSFPQDYP-LMPPKMKFTTEIWHPNVHP-NGEVCI-SILERWLP-VHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMILEH-----------H----------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |